BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZD07FM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig955 1586 0.0 >3x_Contig955 Length = 4159 Score = 1586 bits (800), Expect = 0.0 Identities = 828/832 (99%), Gaps = 4/832 (0%) Strand = Plus / Minus Query: 87 tacttggaactaataactaatggaaaaattgtttggaggaacaaattagaagctattgat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3340 tacttggaactaataactaatggaaaaattgtttggaggaacaaattagaagctattgat 3281 Query: 147 atgaatctaagtacagaaaatggttatgtgtggacgctcgagatcttcggacctgaggac 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3280 atgaatctaagtacagaaaatggttatgtgtggacgctcgagatcttcggacctgaggac 3221 Query: 207 ttcggcatttatttcaaaagctgcatttcttgttattattcagtctccgacgaaaatatg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3220 ttcggcatttatttcaaaagctgcatttcttgttattattcagtctccgacgaaaatatg 3161 Query: 267 caagctctcaattgtgcaactcttcagaactttattgatgtctattacttaccgagtttt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3160 caagctctcaattgtgcaactcttcagaactttattgatgtctattacttaccgagtttt 3101 Query: 327 tttacacaaccaagtactttagaaagaaacatcaaaatttcaatacaacctgattttcca 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3100 tttacacaaccaagtactttagaaagaaacatcaaaatttcaatacaacctgattttcca 3041 Query: 387 gtctcaccgaatgtcacccttcttttagaggacggtaagagtgttctggcctactcattt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3040 gtctcaccgaatgtcacccttcttttagaggacggtaagagtgttctggcctactcattt 2981 Query: 447 attttacaggcccattctatgtatttcagaagacttttctctcaaacctggtcagctaat 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2980 attttacaggcccattctatgtatttcagaagacttttctctcaaacctggtcagctaat 2921 Query: 507 ttcagcgatcataaagtggactggacagatctctcttatgatatctgcagaagcattctt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2920 ttcagcgatcataaagtggactggacagatctctcttatgatatctgcagaagcattctt 2861 Query: 567 gattgcatctataatatatcctgtcaaaagaaatctactcaggtacttgataaaattgca 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2860 gattgcatctataatatatcctgtcaaaagaaatctactcaggtacttgataaaattgca 2801 Query: 627 ttcaatatgggacatcaaaggtatcacgataggttattgcacatgcttgaaatatcagat 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2800 ttcaatatgggacatcaaaggtatcacgataggttattgcacatgcttgaaatatcagat 2741 Query: 687 aaatttatgcttttgacgttagtccaacatatagaaagccagttgatatcatcagttaat 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2740 aaatttatgcttttgacgttagtccaacatatagaaagccagttgatatcatcagttaat 2681 Query: 747 tcaaacaatggttattgc-ttctggattgcagctagcgaccttaatttaccggatttagc 805 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2680 tcaaacaat-gttattgctttctggattgcagctagcgaccttaatttaccggatttagc 2622 Query: 806 cgccaactgtcaggagtatatcttcaggaatccttctgtcttatttagctctgacaccgt 865 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2621 cgccaactgtcaggagtatatcttcaggaatccttctgtcttatttagctctgacaccgt 2562 Query: 866 agagcatattcatgc-aaacatcacatcagaaatgtggaaatccattgagca 916 |||||||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2561 agagcata-tcatgcaaaacatcacatcagaaatgtggaaatccattgagca 2511 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6555 Number of Sequences: 1807 Number of extensions: 6555 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)