BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC12ZD10FM1.SCF screened BAC_end
(921 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1577 1572 0.0
>3x_Contig1577
Length = 10627
Score = 1572 bits (793), Expect = 0.0
Identities = 822/832 (98%)
Strand = Plus / Plus
Query: 90 aaaggagtacagtgaaaaattacgtcaattgaccaaggaatactttgccaaaaaaagcgc 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7265 aaaggagtacagtgaaaaattacgtcaattgaccaaggaatactttgccaaaaaaagcgc 7324
Query: 150 tgaaactgttgctttatctgttggtaattctccaactaccacacccggttctcttgaatg 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7325 tgaaactgttgctttatctgttggtaattctccaactaccacacccggttctcttgaatg 7384
Query: 210 tgcatcacaagtggcttggaatgaagtcttgtctcaaactgaattaatagccaaagatca 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7385 tgcatcacaagtggcttggaatgaagtcttgtctcaaactgaattaatagccaaagatca 7444
Query: 270 tgagaagttctcaaatgacattgcattccacatctgtgagcaattgaaaactttgacgaa 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7445 tgagaagttctcaaatgacattgcattccacatctgtgagcaattgaaaactttgacgaa 7504
Query: 330 ccgatgcaatagcctagtgattagtgctgaaaagttgaatgctgaagtttctggaagaaa 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7505 ccgatgcaatagcctagtgattagtgctgaaaagttgaatgctgaagtttctggaagaaa 7564
Query: 390 gactacatgctatgaaaacttagagaaagctaagaagagatactacgattcttgtcaagt 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7565 gactacatgctatgaaaacttagagaaagctaagaagagatactacgattcttgtcaagt 7624
Query: 450 tatggaaacagccagatcaaagagttctaaatccagctctgaaaaggcgcagagaaggca 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7625 tatggaaacagccagatcaaagagttctaaatccagctctgaaaaggcgcagagaaggca 7684
Query: 510 agctgaaaaagagcatgaaatgaacatcagcaaaaatgactatctaactaaaatcaacca 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7685 agctgaaaaagagcatgaaatgaacatcagcaaaaatgactatctaactaaaatcaacca 7744
Query: 570 agccaatagagtcaaggacaaatactttttccaagatgtgccagagatcttagatatcct 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7745 agccaatagagtcaaggacaaatactttttccaagatgtgccagagatcttagatatcct 7804
Query: 630 tcaagacatcaacgagtcgagggctgccatgttaaatataatatggaataaagcaggtgt 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7805 tcaagacatcaacgagtcgagggctgccatgttaaatataatatggaataaagcaggtgt 7864
Query: 690 cttagagagagaattgaataaaacaattgattcgagattggatgcagctgattcagtcat 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7865 cttagagagagaattgaataaaacaattgattcgagattggatgcagctgattcagtcat 7924
Query: 750 agccaaaaataaaccttatttggacacgtcaatgttcataaagcataacatgaaatcatt 809
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7925 agccaaaaataaaccttatttggacacgtcaatgttcataaagcataacatgaaatcatg 7984
Query: 810 ggaggaacccaaagattttctatacgaaccttcgagtgtatggcacgatgatgaacattt 869
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7985 gaaggaacccaaagattttctatacgaaccttcgagtgtatggcacgatgatgaacattt 8044
Query: 870 tgttgtttacttcccagntgaattatcagatttgaaagtgaaactagcgaag 921
||||||| ||| || | ||||||| |||||||| ||||||||||||||||
Sbjct: 8045 tgttgttaactcccaggttgaattacaagatttgagagtgaaactagcgaag 8096
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7098
Number of Sequences: 1807
Number of extensions: 7098
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)