BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC12ZD11RM1.SCF screened BAC_end
         (931 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1577                                                        1596   0.0  

>3x_Contig1577 
          Length = 10627

 Score = 1596 bits (805), Expect = 0.0
 Identities = 878/897 (97%), Gaps = 7/897 (0%)
 Strand = Plus / Plus

                                                                        
Query: 41   cttgaagctgaagtggaagctgtttgttt---aaaaaacgttgctgatgatt-agtcttg 96
            ||||||||||||||||||||||   || |   ||| |||||||||||||||| |||||||
Sbjct: 8280 cttgaagctgaagtggaagctgaaagtattcaaaacaacgttgctgatgattcagtcttg 8339

                                                                        
Query: 97   gacacct-agaagttgatctatct-aacctgaaaagaaacacgggcttttggggaaattt 154
            ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 8340 gacacctcagaagttgatctatctcaacctgaaaagaaacacgggcttttggggaaattt 8399

                                                                        
Query: 155  aaacagaacctgacaatatcgtctaccctcaacccaatagcgacgaaaacctcaataaac 214
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 8400 aaacagaacctgacaatatcgtctaccctcaacccaatagcgacgaaaacctcaacaaac 8459

                                                                        
Query: 215  aacaattctgatactatttcaatggtatctgcagaaacacaagcatccaagaagtcgaat 274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8460 aacaattctgatactatttcaatggtatctgcagaaacacaagcatccaagaagtcgaat 8519

                                                                        
Query: 275  agattctcaattttcaagaaagttggtcgctcaaagcgaactgaatcgaccccattcgat 334
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8520 agattctcaattttcaagaaagttggtcgctcaaagcgaactgaatcgaccccattcgat 8579

                                                                        
Query: 335  gatgactccgtatcagttgttccctccaatgcagaaagtttcacaccatctcaagaggtg 394
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8580 gatgactccgtatcagttgttccctccaatgcagaaagtttcacaccatctcaagaggtg 8639

                                                                        
Query: 395  tcatacaacaatgatgacactgtgaaaaacactcctactggaattagagccaaagtactc 454
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8640 tcatacaacaatgatgacactgtgaaaaacactcctactggaattagagccaaagtactc 8699

                                                                        
Query: 455  tatagttatacgaaaagtgatgctgatgaagtatctgtcaatggagacactgtcgttact 514
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8700 tatagttatacgaaaagtgatgctgatgaagtatctgtcaatggagacactgtcgttact 8759

                                                                        
Query: 515  gtcttaaacaaagatgccggtaacggatggtcattaattaagttggatacaggcgaacag 574
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8760 gtcttaaacaaagatgccggtaacggatggtcattaattaagttggatacaggcgaacag 8819

                                                                        
Query: 575  ggcctggttcctgaaacctatattcagttacaacaaagtaccactccatcaactagtcgt 634
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8820 ggcctggttcctgaaacctatattcagttacaacaaagtaccactccatcaactagtcgt 8879

                                                                        
Query: 635  gcaccaccaccaagggctccacaacctagaaagagtgctcaaaagactatgaccgcagcc 694
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8880 gcaccaccaccaagggctccacaacctagaaagagtgctcaaaagactatgaccgcagcc 8939

                                                                        
Query: 695  tatccataccagtctcagggtccagatgaactttccttacaggttggagataagatcaag 754
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8940 tatccataccagtctcagggtccagatgaactttccttacaggttggagataagatcaag 8999

                                                                        
Query: 755  gtattaaaggaagatgaaagaaacggctggacgtttggtgagctaaacgggacacagggg 814
            |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 9000 gtattaaaggaagatgaaggaaacggctggacgtttggtgagctaaacgggacaca-ggg 9058

                                                                        
Query: 815  cttgttccccaccacttactgctnctaatncttataaatagctcttgtgtatgaaaattt 874
            ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 9059 cttgttccccaccacttactgctcctaatccttataaatagctcttgtgtatgaaaattt 9118

                                                                     
Query: 875  acgtttatattttcaatttcccataatcattatttctatgctgattttagaatgtaa 931
            |||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 9119 acgtttatatttccaatttcccattatcattatttctatgctgattttagattgtaa 9175


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6336
Number of Sequences: 1807
Number of extensions: 6336
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 931
length of database: 10,358,551
effective HSP length: 16
effective length of query: 915
effective length of database: 10,329,639
effective search space: 9451619685
effective search space used: 9451619685
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)