BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZD11RM1.SCF screened BAC_end (931 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1577 1596 0.0 >3x_Contig1577 Length = 10627 Score = 1596 bits (805), Expect = 0.0 Identities = 878/897 (97%), Gaps = 7/897 (0%) Strand = Plus / Plus Query: 41 cttgaagctgaagtggaagctgtttgttt---aaaaaacgttgctgatgatt-agtcttg 96 |||||||||||||||||||||| || | ||| |||||||||||||||| ||||||| Sbjct: 8280 cttgaagctgaagtggaagctgaaagtattcaaaacaacgttgctgatgattcagtcttg 8339 Query: 97 gacacct-agaagttgatctatct-aacctgaaaagaaacacgggcttttggggaaattt 154 ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 8340 gacacctcagaagttgatctatctcaacctgaaaagaaacacgggcttttggggaaattt 8399 Query: 155 aaacagaacctgacaatatcgtctaccctcaacccaatagcgacgaaaacctcaataaac 214 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 8400 aaacagaacctgacaatatcgtctaccctcaacccaatagcgacgaaaacctcaacaaac 8459 Query: 215 aacaattctgatactatttcaatggtatctgcagaaacacaagcatccaagaagtcgaat 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8460 aacaattctgatactatttcaatggtatctgcagaaacacaagcatccaagaagtcgaat 8519 Query: 275 agattctcaattttcaagaaagttggtcgctcaaagcgaactgaatcgaccccattcgat 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8520 agattctcaattttcaagaaagttggtcgctcaaagcgaactgaatcgaccccattcgat 8579 Query: 335 gatgactccgtatcagttgttccctccaatgcagaaagtttcacaccatctcaagaggtg 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8580 gatgactccgtatcagttgttccctccaatgcagaaagtttcacaccatctcaagaggtg 8639 Query: 395 tcatacaacaatgatgacactgtgaaaaacactcctactggaattagagccaaagtactc 454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8640 tcatacaacaatgatgacactgtgaaaaacactcctactggaattagagccaaagtactc 8699 Query: 455 tatagttatacgaaaagtgatgctgatgaagtatctgtcaatggagacactgtcgttact 514 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8700 tatagttatacgaaaagtgatgctgatgaagtatctgtcaatggagacactgtcgttact 8759 Query: 515 gtcttaaacaaagatgccggtaacggatggtcattaattaagttggatacaggcgaacag 574 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8760 gtcttaaacaaagatgccggtaacggatggtcattaattaagttggatacaggcgaacag 8819 Query: 575 ggcctggttcctgaaacctatattcagttacaacaaagtaccactccatcaactagtcgt 634 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8820 ggcctggttcctgaaacctatattcagttacaacaaagtaccactccatcaactagtcgt 8879 Query: 635 gcaccaccaccaagggctccacaacctagaaagagtgctcaaaagactatgaccgcagcc 694 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8880 gcaccaccaccaagggctccacaacctagaaagagtgctcaaaagactatgaccgcagcc 8939 Query: 695 tatccataccagtctcagggtccagatgaactttccttacaggttggagataagatcaag 754 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8940 tatccataccagtctcagggtccagatgaactttccttacaggttggagataagatcaag 8999 Query: 755 gtattaaaggaagatgaaagaaacggctggacgtttggtgagctaaacgggacacagggg 814 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9000 gtattaaaggaagatgaaggaaacggctggacgtttggtgagctaaacgggacaca-ggg 9058 Query: 815 cttgttccccaccacttactgctnctaatncttataaatagctcttgtgtatgaaaattt 874 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 9059 cttgttccccaccacttactgctcctaatccttataaatagctcttgtgtatgaaaattt 9118 Query: 875 acgtttatattttcaatttcccataatcattatttctatgctgattttagaatgtaa 931 |||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 9119 acgtttatatttccaatttcccattatcattatttctatgctgattttagattgtaa 9175 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6336 Number of Sequences: 1807 Number of extensions: 6336 Number of successful extensions: 44 Number of sequences better than 1.0e-20: 1 length of query: 931 length of database: 10,358,551 effective HSP length: 16 effective length of query: 915 effective length of database: 10,329,639 effective search space: 9451619685 effective search space used: 9451619685 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)