BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC12ZE02FM1.SCF screened BAC_end
         (940 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1742                                                        1554   0.0  

>3x_Contig1742 
          Length = 17167

 Score = 1554 bits (784), Expect = 0.0
 Identities = 839/851 (98%), Gaps = 5/851 (0%)
 Strand = Plus / Plus

                                                                         
Query: 86    tatcctatcgtaaacctaattcatctaatcgtcacatagttaaagtcacttaccatgtta 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11689 tatcctatcgtaaacctaattcatctaatcgtcacatagttaaagtcacttaccatgtta 11748

                                                                         
Query: 146   ttcattctatgagaaaacaatataaaaatgaaaaaccaatgagctcaatatcaccattaa 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11749 ttcattctatgagaaaacaatataaaaatgaaaaaccaatgagctcaatatcaccattaa 11808

                                                                         
Query: 206   ggtctggttgttttacgaaatataaaggggcaggacaaaagatagcagacataccttata 265
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11809 ggtctggttgttttacgaaatataaaggggcaggacaaaagatagcagacataccttata 11868

                                                                         
Query: 266   attgtatctcctattaggaacctctattctctcgctgtaagtttcaaagatattggtttt 325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11869 attgtatctcctattaggaacctctattctctcgctgtaagtttcaaagatattggtttt 11928

                                                                         
Query: 326   gtggtaagcgtttggaggaagcttttaaacacataaacttacaaacaaaatatggcaaca 385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11929 gtggtaagcgtttggaggaagcttttaaacacataaacttacaaacaaaatatggcaaca 11988

                                                                         
Query: 386   gatatcagaacaaacaaggttaagaacgaagagttcaagatctggaagaaaactatccca 445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11989 gatatcagaacaaacaaggttaagaacgaagagttcaagatctggaagaaaactatccca 12048

                                                                         
Query: 446   tccttgtatgagcatatctctacattgcaacctaaaatctttagcccttctgaaagtgcc 505
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12049 tccttgtatgagcatatctctacattgcaacctaaaatctttagcccttctgaaagtgcc 12108

                                                                         
Query: 506   cagtcacctgaaaggagagttttgttcaccgaacttatctcggaagaggcagataagggt 565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12109 cagtcacctgaaaggagagttttgttcaccgaacttatctcggaagaggcagataagggt 12168

                                                                         
Query: 566   ttattgaacacgtctatttactattcgcaacggagcgaaatatacgagattggtgtacag 625
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12169 ttattgaacacgtctatttactattcgcaacggagcgaaatatacgagattggtgtacag 12228

                                                                         
Query: 626   ctgcctattggagcttatacaagtcatgatgataaagagctaccacagcctaggtacagc 685
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12229 ctgcctattggagcttatacaagtcatgatgataaagagctaccacagcctaggtacagc 12288

                                                                         
Query: 686   gaatttttctcagagcctgccaatgcaaaatgggttttcgagggacagtccattgcgtca 745
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12289 gaatttttctcagagcctgccaatgcaaaatgggttttcgagggacagtccattgcgtca 12348

                                                                         
Query: 746   ttcaaagctaaccattccacatcggctctgattgtaatgagtaaaaagggtacactcgca 805
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12349 ttcaaagctaaccattccacatcggctctgattgtaatgagtaaaaagggtacactcgca 12408

                                                                         
Query: 806   tgttacaatggctcttagtagaaacccattg-aaagtttagaaagatcttcanaaaaaga 864
             || ||||||||||| |||||  || |||||| |||||||||||||||||||| |||||||
Sbjct: 12409 tggtacaatggctc-tagtaagaaaccattgaaaagtttagaaagatcttcagaaaaaga 12467

                                                                         
Query: 865   agttacgggctgacttcgatatttcaactgatggaaaatatgtggtcagaattcgaattt 924
              ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| | 
Sbjct: 12468 tgttac-ggctgacttcgatatttcaactgatggaaaatatgtggtcag-attcgaa-tc 12524

                        
Query: 925   tccggttccag 935
             |||||||||||
Sbjct: 12525 tccggttccag 12535


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6309
Number of Sequences: 1807
Number of extensions: 6309
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 940
length of database: 10,358,551
effective HSP length: 16
effective length of query: 924
effective length of database: 10,329,639
effective search space: 9544586436
effective search space used: 9544586436
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)