BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZE02FM1.SCF screened BAC_end (940 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1742 1554 0.0 >3x_Contig1742 Length = 17167 Score = 1554 bits (784), Expect = 0.0 Identities = 839/851 (98%), Gaps = 5/851 (0%) Strand = Plus / Plus Query: 86 tatcctatcgtaaacctaattcatctaatcgtcacatagttaaagtcacttaccatgtta 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11689 tatcctatcgtaaacctaattcatctaatcgtcacatagttaaagtcacttaccatgtta 11748 Query: 146 ttcattctatgagaaaacaatataaaaatgaaaaaccaatgagctcaatatcaccattaa 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11749 ttcattctatgagaaaacaatataaaaatgaaaaaccaatgagctcaatatcaccattaa 11808 Query: 206 ggtctggttgttttacgaaatataaaggggcaggacaaaagatagcagacataccttata 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11809 ggtctggttgttttacgaaatataaaggggcaggacaaaagatagcagacataccttata 11868 Query: 266 attgtatctcctattaggaacctctattctctcgctgtaagtttcaaagatattggtttt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11869 attgtatctcctattaggaacctctattctctcgctgtaagtttcaaagatattggtttt 11928 Query: 326 gtggtaagcgtttggaggaagcttttaaacacataaacttacaaacaaaatatggcaaca 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11929 gtggtaagcgtttggaggaagcttttaaacacataaacttacaaacaaaatatggcaaca 11988 Query: 386 gatatcagaacaaacaaggttaagaacgaagagttcaagatctggaagaaaactatccca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11989 gatatcagaacaaacaaggttaagaacgaagagttcaagatctggaagaaaactatccca 12048 Query: 446 tccttgtatgagcatatctctacattgcaacctaaaatctttagcccttctgaaagtgcc 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12049 tccttgtatgagcatatctctacattgcaacctaaaatctttagcccttctgaaagtgcc 12108 Query: 506 cagtcacctgaaaggagagttttgttcaccgaacttatctcggaagaggcagataagggt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12109 cagtcacctgaaaggagagttttgttcaccgaacttatctcggaagaggcagataagggt 12168 Query: 566 ttattgaacacgtctatttactattcgcaacggagcgaaatatacgagattggtgtacag 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12169 ttattgaacacgtctatttactattcgcaacggagcgaaatatacgagattggtgtacag 12228 Query: 626 ctgcctattggagcttatacaagtcatgatgataaagagctaccacagcctaggtacagc 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12229 ctgcctattggagcttatacaagtcatgatgataaagagctaccacagcctaggtacagc 12288 Query: 686 gaatttttctcagagcctgccaatgcaaaatgggttttcgagggacagtccattgcgtca 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12289 gaatttttctcagagcctgccaatgcaaaatgggttttcgagggacagtccattgcgtca 12348 Query: 746 ttcaaagctaaccattccacatcggctctgattgtaatgagtaaaaagggtacactcgca 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12349 ttcaaagctaaccattccacatcggctctgattgtaatgagtaaaaagggtacactcgca 12408 Query: 806 tgttacaatggctcttagtagaaacccattg-aaagtttagaaagatcttcanaaaaaga 864 || ||||||||||| ||||| || |||||| |||||||||||||||||||| ||||||| Sbjct: 12409 tggtacaatggctc-tagtaagaaaccattgaaaagtttagaaagatcttcagaaaaaga 12467 Query: 865 agttacgggctgacttcgatatttcaactgatggaaaatatgtggtcagaattcgaattt 924 ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 12468 tgttac-ggctgacttcgatatttcaactgatggaaaatatgtggtcag-attcgaa-tc 12524 Query: 925 tccggttccag 935 ||||||||||| Sbjct: 12525 tccggttccag 12535 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6309 Number of Sequences: 1807 Number of extensions: 6309 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 940 length of database: 10,358,551 effective HSP length: 16 effective length of query: 924 effective length of database: 10,329,639 effective search space: 9544586436 effective search space used: 9544586436 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)