BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZE03FM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig757 1491 0.0 >3x_Contig757 Length = 2436 Score = 1491 bits (752), Expect = 0.0 Identities = 814/826 (98%), Gaps = 7/826 (0%) Strand = Plus / Plus Query: 88 tgggtagacaacagaacgttgaggtgaaattacctaatttcgctagaaatattgaaatta 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 tgggtagacaacagaacgttgaggtgaaattacctaatttcgctagaaatattgaaatta 313 Query: 148 acttgccatcgatcgatgttagcactgcaagccaaaatcaattaaggactttcttgacaa 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 acttgccatcgatcgatgttagcactgcaagccaaaatcaattaaggactttcttgacaa 373 Query: 208 agaacaccacccattatttgttgagcagaacagcattagacttcggctcaactgaagcta 267 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374 agaacaccacccagtatttgttgagcagaacagcattagacttcggctcaactgaagcta 433 Query: 268 agctgcaacagtttgttgaaaactatcaagccgttttagcgcaaaactcggttgctgaca 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 agctgcaacagtttgttgaaaactatcaagccgttttagcgcaaaactcggttgctgaca 493 Query: 328 tttacgacaaatacgtatcccaatacaaacagctgttaactcaaaaggctactgaatctg 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 tttacgacaaatacgtatcccaatacaaacagctgttaactcaaaaggctactgaatctg 553 Query: 388 aaacgacagaagaagctcatgcagatgcacaagcagaagaaacgaaataaaggatagact 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 554 aaacgacagaagaagctcatgcagatgcacaagcagaagaaacgaaataaaggatagact 613 Query: 448 tatccgtaaccaatatttcccagaaccgttcatgtatatatatataagaatcaacgtcag 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 614 tatccgtaaccaatatttcccagaaccgttcatgtatatatatataagaatcaacgtcag 673 Query: 508 ttaagaatattactagaaattcaaaaaacattaacaaaatgaccataattcataaagaaa 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 674 ttaagaatattactagaaattcaaaaaacattaacaaaatgaccataattcataaagaaa 733 Query: 568 ctcacacaatatacttctattatataattattgatgtgccgtcacggattcatcgcaaat 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 ctcacacaatatacttctattatataattattgatgtgccgtcacggattcatcgcaaat 793 Query: 628 tgagtaaat-gttcgtcaattagcgcctggtaccatgtcactcccgctagccaactcggg 686 ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 794 tgagtaaatcgttcgtcaa-tagcgcctggtaccatgtcactcccgctagccaactcggg 852 Query: 687 cactgagtttgttcgatctgcaaggaaatcaccgtcaacgagttttccatcattcttttt 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 853 cactgagtttgttcgatctgcaaggaaatcaccgtcaacgagttttccatcattcttttt 912 Query: 747 aagaa-ttcaattttgttgaaattattcanaagctgacataaataccaatcgatgatctc 805 ||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 913 aagaatttcaattttggtgaaattattcaaaagctgacataaataccaatcgatgatctc 972 Query: 806 gcagttcctgtgatccaacggaaatctattggc-aattacggtatactttgaggt-tcaa 863 ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||| Sbjct: 973 gcagttcctgtgatccaacggaaatctattggcaaataacggtatactttgaggtatcaa 1032 Query: 864 atca-caataatgacaggaggagctaa-gaggcttcaggnaaagaa 907 |||| |||||||||||||||||||||| ||||||||||| |||||| Sbjct: 1033 atcaccaataatgacaggaggagctaaggaggcttcagggaaagaa 1078 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9304 Number of Sequences: 1807 Number of extensions: 9304 Number of successful extensions: 102 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)