BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC12ZE03FM1.SCF screened BAC_end
         (934 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig757                                                         1491   0.0  

>3x_Contig757 
          Length = 2436

 Score = 1491 bits (752), Expect = 0.0
 Identities = 814/826 (98%), Gaps = 7/826 (0%)
 Strand = Plus / Plus

                                                                        
Query: 88   tgggtagacaacagaacgttgaggtgaaattacctaatttcgctagaaatattgaaatta 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254  tgggtagacaacagaacgttgaggtgaaattacctaatttcgctagaaatattgaaatta 313

                                                                        
Query: 148  acttgccatcgatcgatgttagcactgcaagccaaaatcaattaaggactttcttgacaa 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314  acttgccatcgatcgatgttagcactgcaagccaaaatcaattaaggactttcttgacaa 373

                                                                        
Query: 208  agaacaccacccattatttgttgagcagaacagcattagacttcggctcaactgaagcta 267
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374  agaacaccacccagtatttgttgagcagaacagcattagacttcggctcaactgaagcta 433

                                                                        
Query: 268  agctgcaacagtttgttgaaaactatcaagccgttttagcgcaaaactcggttgctgaca 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434  agctgcaacagtttgttgaaaactatcaagccgttttagcgcaaaactcggttgctgaca 493

                                                                        
Query: 328  tttacgacaaatacgtatcccaatacaaacagctgttaactcaaaaggctactgaatctg 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494  tttacgacaaatacgtatcccaatacaaacagctgttaactcaaaaggctactgaatctg 553

                                                                        
Query: 388  aaacgacagaagaagctcatgcagatgcacaagcagaagaaacgaaataaaggatagact 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554  aaacgacagaagaagctcatgcagatgcacaagcagaagaaacgaaataaaggatagact 613

                                                                        
Query: 448  tatccgtaaccaatatttcccagaaccgttcatgtatatatatataagaatcaacgtcag 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614  tatccgtaaccaatatttcccagaaccgttcatgtatatatatataagaatcaacgtcag 673

                                                                        
Query: 508  ttaagaatattactagaaattcaaaaaacattaacaaaatgaccataattcataaagaaa 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674  ttaagaatattactagaaattcaaaaaacattaacaaaatgaccataattcataaagaaa 733

                                                                        
Query: 568  ctcacacaatatacttctattatataattattgatgtgccgtcacggattcatcgcaaat 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734  ctcacacaatatacttctattatataattattgatgtgccgtcacggattcatcgcaaat 793

                                                                        
Query: 628  tgagtaaat-gttcgtcaattagcgcctggtaccatgtcactcccgctagccaactcggg 686
            ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 794  tgagtaaatcgttcgtcaa-tagcgcctggtaccatgtcactcccgctagccaactcggg 852

                                                                        
Query: 687  cactgagtttgttcgatctgcaaggaaatcaccgtcaacgagttttccatcattcttttt 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853  cactgagtttgttcgatctgcaaggaaatcaccgtcaacgagttttccatcattcttttt 912

                                                                        
Query: 747  aagaa-ttcaattttgttgaaattattcanaagctgacataaataccaatcgatgatctc 805
            ||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 913  aagaatttcaattttggtgaaattattcaaaagctgacataaataccaatcgatgatctc 972

                                                                        
Query: 806  gcagttcctgtgatccaacggaaatctattggc-aattacggtatactttgaggt-tcaa 863
            ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||
Sbjct: 973  gcagttcctgtgatccaacggaaatctattggcaaataacggtatactttgaggtatcaa 1032

                                                          
Query: 864  atca-caataatgacaggaggagctaa-gaggcttcaggnaaagaa 907
            |||| |||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 1033 atcaccaataatgacaggaggagctaaggaggcttcagggaaagaa 1078


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9304
Number of Sequences: 1807
Number of extensions: 9304
Number of successful extensions: 102
Number of sequences better than 1.0e-20: 1
length of query: 934
length of database: 10,358,551
effective HSP length: 16
effective length of query: 918
effective length of database: 10,329,639
effective search space: 9482608602
effective search space used: 9482608602
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)