BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZE04RM1.SCF screened BAC_end (922 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1777 1635 0.0 >3x_Contig1777 Length = 26319 Score = 1635 bits (825), Expect = 0.0 Identities = 854/863 (98%), Gaps = 1/863 (0%) Strand = Plus / Minus Query: 61 gctacgcgtatgaaaatcagtgtaaatgatccagattatcatttcaaagtaaactcttca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1463 gctacgcgtatgaaaatcagtgtaaatgatccagattatcatttcaaagtaaactcttca 1404 Query: 121 gcatgggaggtctacaaggactcggaagttgatcagttatttgagcagttgataaatatc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1403 gcatgggaggtctacaaggactcggaagttgatcagttatttgagcagttgataaatatc 1344 Query: 181 acagacgatgataaaaagagaagagatcttgaaatttcatggttagagtatcgtataaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1343 acagacgatgataaaaagagaagagatcttgaaatttcatggttagagtatcgtataaaa 1284 Query: 241 ttgctaaagacgatgcctaaagagatgaaaccatccttcttccccgtagtgaaagaaatg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1283 ttgctaaagacgatgcctaaagagatgaaaccatccttcttccccgtagtgaaagaaatg 1224 Query: 301 gtggataatatggttattgtcaaacacgattcccttttggcttggactttatattttgac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1223 gtggataatatggttattgtcaaacacgattcccttttggcttggactttatattttgac 1164 Query: 361 tggaaagactactcgaacgtaaatactatggaaatggatgtgtgcctgagctttatacag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1163 tggaaagactactcgaacgtaaatactatggaaatggatgtgtgcctgagctttatacag 1104 Query: 421 aaattcccaacagaacctttggctatggtaatatatgcatggatatgctctagtatctca 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1103 aaattcccaacagaacctttggctatggtaatatatgcatggatatgctctagtatctca 1044 Query: 481 agttacgatagtgaacgtttgagtgttgatattttaaaattctccgcgaacgaagtgcaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1043 agttacgatagtgaacgtttgagtgttgatattttaaaattctccgcgaacgaagtgcaa 984 Query: 541 cttgaatcagctgatgaaaatgagcgtgatgatgatgaatcagaaactgaaaatatatca 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 983 cttgaatcagctgatgaaaatgagcgtgatgatgatgaatcagaaactgaaaatatatca 924 Query: 601 aacattattgaagtggaagatgaaggcacgaattgtatgactgaggctaacgtattagaa 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 923 aacattattgaagtggaagatgaaggcacgaattgtatgactgaggctaacgtattagaa 864 Query: 661 gtattgcaagagaatattcttaaatgtaaacaaagcatattggcaaatagaatcatttct 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 863 gtattgcaagagaatattcttaaatgtaaacaaagcatattggcaaatagaatcatttct 804 Query: 721 cattattatgtttctcataatgagtttcagcttgcgattccgtatataagatctgggact 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 803 cattattatgtttctcataatgagtttcagcttgcgattccgtatataagatctgggact 744 Query: 781 tccgcggtagcttatgncacgagggatcttggagcatggttgaaaaattccaaa-ttgat 839 |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 743 tccgcggtagcttatgcaacgagggatcttggagcatggttgaaaaattccaaatttgat 684 Query: 840 ttcacattgntatacgccactacatacacatacttcgaggctttcaaaaatcataacatt 899 ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 683 ttcacattgttatacgccactacatacacatacttcgaggctccaaaaaatcataacatt 624 Query: 900 gcactttcatttattgacaaagt 922 ||||||||||| |||||||||| Sbjct: 623 gcactttcattatttgacaaagt 601 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8012 Number of Sequences: 1807 Number of extensions: 8012 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 922 length of database: 10,358,551 effective HSP length: 16 effective length of query: 906 effective length of database: 10,329,639 effective search space: 9358652934 effective search space used: 9358652934 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)