BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC12ZE04RM1.SCF screened BAC_end
         (922 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1777                                                        1635   0.0  

>3x_Contig1777 
          Length = 26319

 Score = 1635 bits (825), Expect = 0.0
 Identities = 854/863 (98%), Gaps = 1/863 (0%)
 Strand = Plus / Minus

                                                                        
Query: 61   gctacgcgtatgaaaatcagtgtaaatgatccagattatcatttcaaagtaaactcttca 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1463 gctacgcgtatgaaaatcagtgtaaatgatccagattatcatttcaaagtaaactcttca 1404

                                                                        
Query: 121  gcatgggaggtctacaaggactcggaagttgatcagttatttgagcagttgataaatatc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1403 gcatgggaggtctacaaggactcggaagttgatcagttatttgagcagttgataaatatc 1344

                                                                        
Query: 181  acagacgatgataaaaagagaagagatcttgaaatttcatggttagagtatcgtataaaa 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1343 acagacgatgataaaaagagaagagatcttgaaatttcatggttagagtatcgtataaaa 1284

                                                                        
Query: 241  ttgctaaagacgatgcctaaagagatgaaaccatccttcttccccgtagtgaaagaaatg 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1283 ttgctaaagacgatgcctaaagagatgaaaccatccttcttccccgtagtgaaagaaatg 1224

                                                                        
Query: 301  gtggataatatggttattgtcaaacacgattcccttttggcttggactttatattttgac 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1223 gtggataatatggttattgtcaaacacgattcccttttggcttggactttatattttgac 1164

                                                                        
Query: 361  tggaaagactactcgaacgtaaatactatggaaatggatgtgtgcctgagctttatacag 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163 tggaaagactactcgaacgtaaatactatggaaatggatgtgtgcctgagctttatacag 1104

                                                                        
Query: 421  aaattcccaacagaacctttggctatggtaatatatgcatggatatgctctagtatctca 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1103 aaattcccaacagaacctttggctatggtaatatatgcatggatatgctctagtatctca 1044

                                                                        
Query: 481  agttacgatagtgaacgtttgagtgttgatattttaaaattctccgcgaacgaagtgcaa 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 agttacgatagtgaacgtttgagtgttgatattttaaaattctccgcgaacgaagtgcaa 984

                                                                        
Query: 541  cttgaatcagctgatgaaaatgagcgtgatgatgatgaatcagaaactgaaaatatatca 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983  cttgaatcagctgatgaaaatgagcgtgatgatgatgaatcagaaactgaaaatatatca 924

                                                                        
Query: 601  aacattattgaagtggaagatgaaggcacgaattgtatgactgaggctaacgtattagaa 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923  aacattattgaagtggaagatgaaggcacgaattgtatgactgaggctaacgtattagaa 864

                                                                        
Query: 661  gtattgcaagagaatattcttaaatgtaaacaaagcatattggcaaatagaatcatttct 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863  gtattgcaagagaatattcttaaatgtaaacaaagcatattggcaaatagaatcatttct 804

                                                                        
Query: 721  cattattatgtttctcataatgagtttcagcttgcgattccgtatataagatctgggact 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803  cattattatgtttctcataatgagtttcagcttgcgattccgtatataagatctgggact 744

                                                                        
Query: 781  tccgcggtagcttatgncacgagggatcttggagcatggttgaaaaattccaaa-ttgat 839
            ||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 743  tccgcggtagcttatgcaacgagggatcttggagcatggttgaaaaattccaaatttgat 684

                                                                        
Query: 840  ttcacattgntatacgccactacatacacatacttcgaggctttcaaaaatcataacatt 899
            ||||||||| ||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 683  ttcacattgttatacgccactacatacacatacttcgaggctccaaaaaatcataacatt 624

                                   
Query: 900  gcactttcatttattgacaaagt 922
            |||||||||||  ||||||||||
Sbjct: 623  gcactttcattatttgacaaagt 601


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8012
Number of Sequences: 1807
Number of extensions: 8012
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)