BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZE06FM1.SCF screened BAC_end (942 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1442 1526 0.0 >3x_Contig1442 Length = 8270 Score = 1526 bits (770), Expect = 0.0 Identities = 836/853 (98%), Gaps = 4/853 (0%) Strand = Plus / Minus Query: 86 taacaaacgatcgtctccagatcaattgagctataactctttcaccactatgaagaaaaa 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5238 taacaaacgatcgtctccagatcaattgagctataactctttcaccactatgaagaaaaa 5179 Query: 146 tcacataaaaaaaccgtgaacctgaacaggaactttcaaaagtgcgttcttagtgaaaag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5178 tcacataaaaaaaccgtgaacctgaacaggaactttcaaaagtgcgttcttagtgaaaag 5119 Query: 206 aaaaaaacaccaaatgtatcttcactggctcctgaacaacaccttatatttcaaaacaat 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5118 aaaaaaacaccaaatgtatcttcactggctcctgaacaacaccttatatttcaaaacaat 5059 Query: 266 aaagtcatctcatgaccatctattcgtaaaccaactgctcttctcttacttttacgtatg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5058 aaagtcatctcatgaccatctattcgtaaaccaactgctcttctcttacttttacgtatg 4999 Query: 326 ttgagcctttccgatttctcaacatcccaacaaattcgcaaaaaccatgcgatgctgaag 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4998 ttgagcctttccgatttctcaacatcccaacaaattcgcaaaaaccatgcgatgctgaag 4939 Query: 386 agggaaatggtgttacccgaccattacgttatcatgagtagacacgtgaccgtaaagatc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4938 agggaaatggtgttacccgaccattacgttatcatgagtagacacgtgaccgtaaagatc 4879 Query: 446 tttaggtgtcctcgctaaggtgatgatcggtatcacctggtgttcggtaccgctcagtgg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4878 tttaggtgtcctcgctaaggtgatgatcggtatcacctggtgttcggtaccgctcagtgg 4819 Query: 506 ttgtatttggtgttgggatgatcgtatctccaaagcctgttgtggaaggagtagttggag 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4818 ttgtatttggtgttgggatgatcgtatctccaaagcctgttgtggaaggagtagttggag 4759 Query: 566 ggattgttgtagcttctgttgggttttgttgttgcggttgatgatgatggtggtgatgat 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4758 ggattgttgtagcttctgttgggttttgttgttgcggttgatgatgatggtggtgatgat 4699 Query: 626 gggtattctgatgttctggatccgtgtctgattcagaagcgtctctggtaggcgtttgaa 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4698 gggtattctgatgttctggatccgtgtctgattcagaagcgtctctggtaggcgtttgaa 4639 Query: 686 ctcctgtactatttncagtggtgtttgttgagtttgattcttgacaccagtacctatgaa 745 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4638 ctcctgtactatttccagtggtgtttgttgagtttgattcttgacaccagtacctatgaa 4579 Query: 746 attcccatgatttcaggtggcacagtcttgagcaatatttggtgcgcttacaccttctac 805 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4578 attcccatgatttcagttggcacagtcttgagcaatatttggtgcgcttacaccttctac 4519 Query: 806 atttggggacttgttttggatgatctttccattttccacagcttgaattagcacactgcc 865 ||||||||| |||||||||||||||| |||||| |||||||| ||||||||||||||| Sbjct: 4518 atttggggaactgttttggatgatcttcccatttcccacagctgaaattagcacactgcc 4459 Query: 866 tgaactcctgta-cctcatgttttcttcacgagttt-tcttataccacggagctccagtt 923 || ||||||||| |||||||||| || ||||||||| || | ||||||||||||||||| Sbjct: 4458 tg-actcctgtagcctcatgtttcctgcacgagtttctcat-taccacggagctccagta 4401 Query: 924 atgcacgatttcg 936 |||||||||||| Sbjct: 4400 gtgcacgatttcg 4388 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6809 Number of Sequences: 1807 Number of extensions: 6809 Number of successful extensions: 111 Number of sequences better than 1.0e-20: 1 length of query: 942 length of database: 10,358,551 effective HSP length: 16 effective length of query: 926 effective length of database: 10,329,639 effective search space: 9565245714 effective search space used: 9565245714 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)