BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC12ZE06FM1.SCF screened BAC_end
         (942 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1442                                                        1526   0.0  

>3x_Contig1442 
          Length = 8270

 Score = 1526 bits (770), Expect = 0.0
 Identities = 836/853 (98%), Gaps = 4/853 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   taacaaacgatcgtctccagatcaattgagctataactctttcaccactatgaagaaaaa 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5238 taacaaacgatcgtctccagatcaattgagctataactctttcaccactatgaagaaaaa 5179

                                                                        
Query: 146  tcacataaaaaaaccgtgaacctgaacaggaactttcaaaagtgcgttcttagtgaaaag 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5178 tcacataaaaaaaccgtgaacctgaacaggaactttcaaaagtgcgttcttagtgaaaag 5119

                                                                        
Query: 206  aaaaaaacaccaaatgtatcttcactggctcctgaacaacaccttatatttcaaaacaat 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5118 aaaaaaacaccaaatgtatcttcactggctcctgaacaacaccttatatttcaaaacaat 5059

                                                                        
Query: 266  aaagtcatctcatgaccatctattcgtaaaccaactgctcttctcttacttttacgtatg 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5058 aaagtcatctcatgaccatctattcgtaaaccaactgctcttctcttacttttacgtatg 4999

                                                                        
Query: 326  ttgagcctttccgatttctcaacatcccaacaaattcgcaaaaaccatgcgatgctgaag 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4998 ttgagcctttccgatttctcaacatcccaacaaattcgcaaaaaccatgcgatgctgaag 4939

                                                                        
Query: 386  agggaaatggtgttacccgaccattacgttatcatgagtagacacgtgaccgtaaagatc 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4938 agggaaatggtgttacccgaccattacgttatcatgagtagacacgtgaccgtaaagatc 4879

                                                                        
Query: 446  tttaggtgtcctcgctaaggtgatgatcggtatcacctggtgttcggtaccgctcagtgg 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4878 tttaggtgtcctcgctaaggtgatgatcggtatcacctggtgttcggtaccgctcagtgg 4819

                                                                        
Query: 506  ttgtatttggtgttgggatgatcgtatctccaaagcctgttgtggaaggagtagttggag 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4818 ttgtatttggtgttgggatgatcgtatctccaaagcctgttgtggaaggagtagttggag 4759

                                                                        
Query: 566  ggattgttgtagcttctgttgggttttgttgttgcggttgatgatgatggtggtgatgat 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4758 ggattgttgtagcttctgttgggttttgttgttgcggttgatgatgatggtggtgatgat 4699

                                                                        
Query: 626  gggtattctgatgttctggatccgtgtctgattcagaagcgtctctggtaggcgtttgaa 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4698 gggtattctgatgttctggatccgtgtctgattcagaagcgtctctggtaggcgtttgaa 4639

                                                                        
Query: 686  ctcctgtactatttncagtggtgtttgttgagtttgattcttgacaccagtacctatgaa 745
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4638 ctcctgtactatttccagtggtgtttgttgagtttgattcttgacaccagtacctatgaa 4579

                                                                        
Query: 746  attcccatgatttcaggtggcacagtcttgagcaatatttggtgcgcttacaccttctac 805
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4578 attcccatgatttcagttggcacagtcttgagcaatatttggtgcgcttacaccttctac 4519

                                                                        
Query: 806  atttggggacttgttttggatgatctttccattttccacagcttgaattagcacactgcc 865
            |||||||||  |||||||||||||||| |||||| ||||||||  |||||||||||||||
Sbjct: 4518 atttggggaactgttttggatgatcttcccatttcccacagctgaaattagcacactgcc 4459

                                                                        
Query: 866  tgaactcctgta-cctcatgttttcttcacgagttt-tcttataccacggagctccagtt 923
            || ||||||||| |||||||||| || ||||||||| || | ||||||||||||||||| 
Sbjct: 4458 tg-actcctgtagcctcatgtttcctgcacgagtttctcat-taccacggagctccagta 4401

                         
Query: 924  atgcacgatttcg 936
             ||||||||||||
Sbjct: 4400 gtgcacgatttcg 4388


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6809
Number of Sequences: 1807
Number of extensions: 6809
Number of successful extensions: 111
Number of sequences better than 1.0e-20: 1
length of query: 942
length of database: 10,358,551
effective HSP length: 16
effective length of query: 926
effective length of database: 10,329,639
effective search space: 9565245714
effective search space used: 9565245714
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)