BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC12ZF02FM1.SCF screened BAC_end
         (949 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1652                                                        1522   0.0  

>3x_Contig1652 
          Length = 14842

 Score = 1522 bits (768), Expect = 0.0
 Identities = 809/816 (99%), Gaps = 5/816 (0%)
 Strand = Plus / Minus

                                                                         
Query: 86    cttgagtctttccttcctttcttcagctttcttggatctcttcttttcatccttcgcatt 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12559 cttgagtctttccttcctttcttcagctttcttggatctcttcttttcatccttcgcatt 12500

                                                                         
Query: 146   cgaaatggtgagaaccttttgcatgaaggaacgtgcctttttctcttcgccgcctagaac 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12499 cgaaatggtgagaaccttttgcatgaaggaacgtgcctttttctcttcgccgcctagaac 12440

                                                                         
Query: 206   gacagctctcttagccatgtatgttttcttcttttgcggtttcatttgatagatctggga 265
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12439 gacagctctcttagccatgtatgttttcttcttttgcggtttcatttgatagatctggga 12380

                                                                         
Query: 266   tttgaaaggtaagtctttggcaacagattttggtacctttaaaccgttgaagttcctttc 325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12379 tttgaaaggtaagtctttggcaacagattttggtacctttaaaccgttgaagttcctttc 12320

                                                                         
Query: 326   aactctttcaaccttcttatatgtactgtcattgttggtcggtaaatcgattccaagaga 385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12319 aactctttcaaccttcttatatgtactgtcattgttggtcggtaaatcgattccaagaga 12260

                                                                         
Query: 386   tgctctaatttgaccagttagtctcaaacccttccattcagttttatcttttagcaacaa 445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12259 tgctctaatttgaccagttagtctcaaacccttccattcagttttatcttttagcaacaa 12200

                                                                         
Query: 446   tgaagtaactgggttgtagaatttcttaacttggattggataccatgacctaagaattat 505
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12199 tgaagtaactgggttgtagaatttcttaacttggattggataccatgacctaagaattat 12140

                                                                         
Query: 506   aatgtcactcaatagtatcttatcctcaaaagttgccctgaaatggccttctggttttga 565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12139 aatgtcactcaatagtatcttatcctcaaaagttgccctgaaatggccttctggttttga 12080

                                                                         
Query: 566   tagagcacgcttgatttcaccacgaataccggaaacagtcttgatttgggcaccttcgaa 625
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12079 tagagcacgcttgatttcaccacgaataccggaaacagtcttgatttgggcaccttcgaa 12020

                                                                         
Query: 626   ccgtgcaacttccatagcgctagagaacatatcctttatgaaggcagtgttcttgaagat 685
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12019 ccgtgcaacttccatagcgctagagaacatatcctttatgaaggcagtgttcttgaagat 11960

                                                                         
Query: 686   tttgtaaggataaccaacaagctttaatttcttcacaatttctacgcttgcatcgatctc 745
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11959 tttgtaaggataaccaacaagctttaatttcttcacaatttctacgcttgcatcgatctc 11900

                                                                         
Query: 746   ctctacaataccagtcgcagctattctgaaacttccagttgtatcactgttagcaactat 805
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11899 ctctacaataccagtcgcagctattctgaaacttccagttgtatcactgttagcaactat 11840

                                                                         
Query: 806   ttgaacaccacacgaaagtggtattttgtcgagcacaaggggaccatagtaagaagctgt 865
             |||||||||||| |||||||||| |||| ||||||||| |||||||||| ||||||||||
Sbjct: 11839 ttgaacaccaca-gaaagtggta-tttggcgagcacaa-gggaccatagaaagaagctgt 11783

                                                 
Query: 866   acaatatagcatgttcttggagtatacttcaacatt 901
             |||||| ||||||||| |||||||||||||||||||
Sbjct: 11782 acaata-agcatgttc-tggagtatacttcaacatt 11749


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7216
Number of Sequences: 1807
Number of extensions: 7216
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 949
length of database: 10,358,551
effective HSP length: 16
effective length of query: 933
effective length of database: 10,329,639
effective search space: 9637553187
effective search space used: 9637553187
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)