BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZF06RM1.SCF screened BAC_end (938 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig925 1689 0.0 >3x_Contig925 Length = 3823 Score = 1689 bits (852), Expect = 0.0 Identities = 876/884 (99%) Strand = Plus / Minus Query: 54 tttcccccccctttgaatattaaaacaaccttatactagatagaaaaggcaggttttttt 113 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 3442 tttcccccccctttgaatatgaaaacaaccttatactagatagaaaaggcaggttttttt 3383 Query: 114 cagatcctctttagctgcgcttattgattccaaaatattagtaaactatagttactgtag 173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3382 cagatcctctttagctgcgcttattgattccaaaatattagtaaactatagttactgtag 3323 Query: 174 agcgtgcagtggtgctggtatgaccttttaacctggtgagatgttcatgattatgagtta 233 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 3322 agcgtgcagtggtgctggtatgaccttttaacctggtgagatgttcatgaagatgagtta 3263 Query: 234 gatgtaaatccttatgatcgttgttttaatatcaaaaaactcaaaacgcgaaaacgcgaa 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3262 gatgtaaatccttatgatcgttgttttaatatcaaaaaactcaaaacgcgaaaacgcgaa 3203 Query: 294 actggtgttttggggagagttttcgggcccatttctggggaccggaaactggggatgcga 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3202 actggtgttttggggagagttttcgggcccatttctggggaccggaaactggggatgcga 3143 Query: 354 ttaaaagacagtacagacagcactctcaaccgcagagacctcatatatagccataacgcc 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3142 ttaaaagacagtacagacagcactctcaaccgcagagacctcatatatagccataacgcc 3083 Query: 414 cacaaagggtttatagatgatctactggcccttcacaagctctaaatcgctgatacatga 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3082 cacaaagggtttatagatgatctactggcccttcacaagctctaaatcgctgatacatga 3023 Query: 474 ggaattgaccgatatttagccgtatcttgtctttaacccactttgttacccggccttttg 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3022 ggaattgaccgatatttagccgtatcttgtctttaacccactttgttacccggccttttg 2963 Query: 534 ccctttttccgtaatcatttgaccacttaatcattgaactatccaatcaagtcacttaac 593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2962 ccctttttccgtaatcatttgaccacttaatcattgaactatccaatcaagtcacttaac 2903 Query: 594 gatgagtaacatcacttctgttcagtctctgtatacttaacttgtccatttgacgagtct 653 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2902 gatgagtaacatcacttctgttcagtctctgtatacttaacttgtccatttgacgagtct 2843 Query: 654 ccgacagctagctagactgttataataccaattgtccccgccatgtcagttctcagacca 713 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2842 ccgacagctagctagactgttataataccaattgtccccgccatgtcagttctcagacca 2783 Query: 714 ttaagattgttactactgggtgcacccggttctggtaaaggtactcagacctcgaaactg 773 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2782 ttaagattgttactactgggtgcacccggttctggtaaaggtactcagacctcgaaactg 2723 Query: 774 ttgaaagaattcggatccatcaaagctatctcatctggagatttgctacgtaaacagatt 833 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2722 ttgaaagaattcggatccatcaaggctatctcatctggagatttgctacgtaaacagatt 2663 Query: 834 gaacatggcacaccgttaggttttagtgcctcctcgtatattgagaaaggccagttgtta 893 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2662 gaacatggcacaccgttaggtttaagtgcctcctcgtatattgagaaaggccagttgtta 2603 Query: 894 cccgatgatttgatcaccgggagtgtgtgtgacgaattgaagtc 937 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2602 cccgatgatttgatcaccggagttgtgtgtgacgaattgaagtc 2559 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5483 Number of Sequences: 1807 Number of extensions: 5483 Number of successful extensions: 37 Number of sequences better than 1.0e-20: 1 length of query: 938 length of database: 10,358,551 effective HSP length: 16 effective length of query: 922 effective length of database: 10,329,639 effective search space: 9523927158 effective search space used: 9523927158 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)