BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC12ZF07FM1.SCF screened BAC_end
(918 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1614 0.0
>3x_Contig1795
Length = 38452
Score = 1614 bits (814), Expect = 0.0
Identities = 831/834 (99%), Gaps = 2/834 (0%)
Strand = Plus / Plus
Query: 86 cactcttgttatacttcgattgtagttccgtattagcgtcctctaaagattggcaacgct 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34047 cactcttgttatacttcgattgtagttccgtattagcgtcctctaaagattggcaacgct 34106
Query: 146 ctgtttcaatccgcaaatcctgtctcaatgtctgaatctgttcattaagattgtttaact 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34107 ctgtttcaatccgcaaatcctgtctcaatgtctgaatctgttcattaagattgtttaact 34166
Query: 206 tctcattgaggtctttgatggcccattccttcaccgattgttcgttctcatagtgtgtga 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34167 tctcattgaggtctttgatggcccattccttcaccgattgttcgttctcatagtgtgtga 34226
Query: 266 tctcttcgctcaatatttttatctggttggcgtatttttgaagtaattgcctctgctcag 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34227 tctcttcgctcaatatttttatctggttggcgtatttttgaagtaattgcctctgctcag 34286
Query: 326 cagccgtgccaccaacatccattgctcctatataccccaggcagtgtgaagagtgccaca 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34287 cagccgtgccaccaacatccattgctcctatataccccaggcagtgtgaagagtgccaca 34346
Query: 386 gttttcgattatactcagtctcccatctatcaattgatgctaattttatatattcttata 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34347 gttttcgattatactcagtctcccatctatcaattgatgctaattttatatattcttata 34406
Query: 446 cttgttgaaatatctctttctgaaatctgtttgaatgagatcggcgaaattctacttaca 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34407 cttgttgaaatatctctttctgaaatctgtttgaatgagatcggcgaaattctacttaca 34466
Query: 506 atctcaaaataaatacagtttcttgtcaattcgttttcgaaggcatccaaagtgtctagg 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34467 atctcaaaataaatacagtttcttgtcaattcgttttcgaaggcatccaaagtgtctagg 34526
Query: 566 ttacgttctgtgcacgatatataaccgtgtgcccctttaaactgactcaaacatttcaca 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34527 ttacgttctgtgcacgatatataaccgtgtgcccctttaaactgactcaaacatttcaca 34586
Query: 626 agatcaggtatcacgctggtatcatacgtaacatctgctgccaaaatcagatcaatttcg 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34587 agatcaggtatcacgctggtatcatacgtaacatctgctgccaaaatcagatcaatttcg 34646
Query: 686 ttgtaattagataattcatcctcgttccatcgtaatctctggaaccctatgtttacgtcg 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34647 ttgtaattagataattcatcctcgttccatcgtaatctctggaaccctatgtttacgtcg 34706
Query: 746 ccatcattggataatgaaccattgagttg-aaattggtactaacctgttgtaacagatta 804
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 34707 ccatcattggataatgaaccattgagttgaaaattggtactaacctgttgtaacagatta 34766
Query: 805 gaatctccgtcagtgactataattgtgccagctttgcagtcaccttgggaatcttttatc 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34767 gaatctccgtcagtgactataattgtgccagctttgcagtcaccttgggaatcttttatc 34826
Query: 865 atcttatataaaattgagattatcccagt-ccacatcccaattcgagcattaaa 917
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 34827 atcttatataaaattgagattataccagtaccacatcccaattcgagcattaaa 34880
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5923
Number of Sequences: 1807
Number of extensions: 5923
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)