BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC12ZF11FM1.SCF screened BAC_end
         (938 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1801                                                        1594   0.0  

>3x_Contig1801 
          Length = 57606

 Score = 1594 bits (804), Expect = 0.0
 Identities = 843/854 (98%), Gaps = 2/854 (0%)
 Strand = Plus / Plus

                                                                         
Query: 86    cctacgaattcatcaaaccgttggccgtgagagctgccatgaatgcgttcccatacgcca 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36748 cctacgaattcatcaaaccgttggccgtgagagctgccatgaatgcgttcccatacgcca 36807

                                                                         
Query: 146   aatatttctggttcttcgaccaaaacgggctaataatgcaacttgacacttccttacaac 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36808 aatatttctggttcttcgaccaaaacgggctaataatgcaacttgacacttccttacaac 36867

                                                                         
Query: 206   aacaactattggaacctaaggtattggatgcagctgtcttgaaaagcgttccagtgttcg 265
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36868 aacaactattggaaccaaaggtattggatgcagctgtcttgaaaagcgttccagtgttcg 36927

                                                                         
Query: 266   agaagtcgaacatcaagacctacaaacacttcgatgcaaagaccgctaaaatcattatac 325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36928 agaagtcgaacatcaagacctacaaacacttcgatgcaaagaccgctaaaatcattatac 36987

                                                                         
Query: 326   caaaaaccggtgcggggaaactggacacctccagtttcgtcgttactcccagtatacacg 385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36988 caaaaaccggtgcggggaaactggacacctccagtttcgtcgttactcccagtatacacg 37047

                                                                         
Query: 386   gtaaagcgttcctagattacataaacgacccattggtgagaaactacccatggccatcct 445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37048 gtaaagcgttcctagattacataaacgacccattggtgagaaactacccatggccatcct 37107

                                                                         
Query: 446   cgttcactagcgcgatcgggcacttgctacaatggcatccaagaatactaaagagaaccg 505
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37108 cgttcactagcgcgatcgggcacttgctacaatggcatccaagaatactaaagagaaccg 37167

                                                                         
Query: 506   cattggtggtacccaagactattgcctccgtgtacagtccctcagcagttaaaaaacaag 565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37168 cattggtggtacccaagactattgcctccgtgtacagtccctcagcagttaaaaaacaag 37227

                                                                         
Query: 566   cggacgatgcagaaaggttcaattatatggacggagacttcgtcatcacgtttactggat 625
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37228 cggacgatgcagaaaggttcaattatatggacggagacttcgtcatcacgtttactggat 37287

                                                                         
Query: 626   gtgaagcgtccaaaacttgtgagatagaactggacaaacattatcagctagttaagcagg 685
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37288 gtgaagcgtccaaaacttgtgagatagaactggacaaacattatcagctagttaagcagg 37347

                                                                         
Query: 686   actgaaccaactctcatatacttttgtattcattcttttatatagaacttataactataa 745
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 37348 actgaaccaactctcatatacttttgtattcattcttctatatagaacttataactataa 37407

                                                                         
Query: 746   tcactattatttccaaaaatcctgccgatgttgcccctgcaaaaacttcacacataacta 805
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 37408 tcactattatttccaaaaatcctgccgatgttgcccctgcaaaaacttcacacaaaacta 37467

                                                                         
Query: 806   gtgcacggaagaacaattcgaagcatgttcgcagcatcttgcagcanactttatcctgct 865
             |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 37468 gtgcacggaagaacaattcgaagcatgttcgcagcatcttgcagcaaactttatcctgct 37527

                                                                         
Query: 866   gtcacatgttctttaacccttttcgttcgaggacgcgaaaatgc-atgtncttcttctgc 924
             ||||||||||||| |||| |||||||||||||||||| |||||| |||| ||||||||||
Sbjct: 37528 gtcacatgttcttaaacctttttcgttcgaggacgcg-aaatgcaatgttcttcttctgc 37586

                           
Query: 925   ccgttctgtgtgtt 938
             |  |||||||||||
Sbjct: 37587 cgtttctgtgtgtt 37600


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5230
Number of Sequences: 1807
Number of extensions: 5230
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 938
length of database: 10,358,551
effective HSP length: 16
effective length of query: 922
effective length of database: 10,329,639
effective search space: 9523927158
effective search space used: 9523927158
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)