BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZF11FM1.SCF screened BAC_end (938 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1801 1594 0.0 >3x_Contig1801 Length = 57606 Score = 1594 bits (804), Expect = 0.0 Identities = 843/854 (98%), Gaps = 2/854 (0%) Strand = Plus / Plus Query: 86 cctacgaattcatcaaaccgttggccgtgagagctgccatgaatgcgttcccatacgcca 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36748 cctacgaattcatcaaaccgttggccgtgagagctgccatgaatgcgttcccatacgcca 36807 Query: 146 aatatttctggttcttcgaccaaaacgggctaataatgcaacttgacacttccttacaac 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36808 aatatttctggttcttcgaccaaaacgggctaataatgcaacttgacacttccttacaac 36867 Query: 206 aacaactattggaacctaaggtattggatgcagctgtcttgaaaagcgttccagtgttcg 265 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36868 aacaactattggaaccaaaggtattggatgcagctgtcttgaaaagcgttccagtgttcg 36927 Query: 266 agaagtcgaacatcaagacctacaaacacttcgatgcaaagaccgctaaaatcattatac 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36928 agaagtcgaacatcaagacctacaaacacttcgatgcaaagaccgctaaaatcattatac 36987 Query: 326 caaaaaccggtgcggggaaactggacacctccagtttcgtcgttactcccagtatacacg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36988 caaaaaccggtgcggggaaactggacacctccagtttcgtcgttactcccagtatacacg 37047 Query: 386 gtaaagcgttcctagattacataaacgacccattggtgagaaactacccatggccatcct 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37048 gtaaagcgttcctagattacataaacgacccattggtgagaaactacccatggccatcct 37107 Query: 446 cgttcactagcgcgatcgggcacttgctacaatggcatccaagaatactaaagagaaccg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37108 cgttcactagcgcgatcgggcacttgctacaatggcatccaagaatactaaagagaaccg 37167 Query: 506 cattggtggtacccaagactattgcctccgtgtacagtccctcagcagttaaaaaacaag 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37168 cattggtggtacccaagactattgcctccgtgtacagtccctcagcagttaaaaaacaag 37227 Query: 566 cggacgatgcagaaaggttcaattatatggacggagacttcgtcatcacgtttactggat 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37228 cggacgatgcagaaaggttcaattatatggacggagacttcgtcatcacgtttactggat 37287 Query: 626 gtgaagcgtccaaaacttgtgagatagaactggacaaacattatcagctagttaagcagg 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37288 gtgaagcgtccaaaacttgtgagatagaactggacaaacattatcagctagttaagcagg 37347 Query: 686 actgaaccaactctcatatacttttgtattcattcttttatatagaacttataactataa 745 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 37348 actgaaccaactctcatatacttttgtattcattcttctatatagaacttataactataa 37407 Query: 746 tcactattatttccaaaaatcctgccgatgttgcccctgcaaaaacttcacacataacta 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 37408 tcactattatttccaaaaatcctgccgatgttgcccctgcaaaaacttcacacaaaacta 37467 Query: 806 gtgcacggaagaacaattcgaagcatgttcgcagcatcttgcagcanactttatcctgct 865 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 37468 gtgcacggaagaacaattcgaagcatgttcgcagcatcttgcagcaaactttatcctgct 37527 Query: 866 gtcacatgttctttaacccttttcgttcgaggacgcgaaaatgc-atgtncttcttctgc 924 ||||||||||||| |||| |||||||||||||||||| |||||| |||| |||||||||| Sbjct: 37528 gtcacatgttcttaaacctttttcgttcgaggacgcg-aaatgcaatgttcttcttctgc 37586 Query: 925 ccgttctgtgtgtt 938 | ||||||||||| Sbjct: 37587 cgtttctgtgtgtt 37600 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5230 Number of Sequences: 1807 Number of extensions: 5230 Number of successful extensions: 32 Number of sequences better than 1.0e-20: 1 length of query: 938 length of database: 10,358,551 effective HSP length: 16 effective length of query: 922 effective length of database: 10,329,639 effective search space: 9523927158 effective search space used: 9523927158 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)