BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZF11RM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1512 1665 0.0 >3x_Contig1512 Length = 8803 Score = 1665 bits (840), Expect = 0.0 Identities = 876/887 (98%), Gaps = 1/887 (0%) Strand = Plus / Minus Query: 43 gcttctcttctttctctgggttcattagaatcaaatttatcgtttataatacgctctatg 102 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 5955 gcttctcttctttctctgggttcataagaatcaaatttatcgtttataatacgctctatg 5896 Query: 103 tggttcatcttggtaagtatccttaaccgtgtctcctctgaatacatcaaattaaacatg 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5895 tggttcatcttggtaagtatccttaaccgtgtctcctctgaatacatcaaattaaacatg 5836 Query: 163 gtgtcccttatctttggatgtaacgatattacaaaagtccatccggcacataattatttt 222 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 5835 gtgtcccttatctttggatgtaacgatattacaaaagtccatccggcacataaaaagatg 5776 Query: 223 aatttccaaggtattagcgaggaaatactatcaatagctagcgaattgatacaagagaat 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5775 aatttccaaggtattagcgaggaaatactatcaatagctagcgaattgatacaagagaat 5716 Query: 283 agcagtagtcctagaaatacggccgaactgacattctcgttcttaaagtatgcaaactta 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5715 agcagtagtcctagaaatacggccgaactgacattctcgttcttaaagtatgcaaactta 5656 Query: 343 gccaaaaaattcgatacgaaatcgtatgccatcacatataacgtcatatggttctgcaag 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5655 gccaaaaaattcgatacgaaatcgtatgccatcacatataacgtcatatggttctgcaag 5596 Query: 403 tcagttaagtttaatatgaactccttgctaaactctggaacaggacctggcaattgtgga 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5595 tcagttaagtttaatatgaactccttgctaaactctggaacaggacctggcaattgtgga 5536 Query: 463 tttttcaacggaggcccgcgagcaggaattgggttatgatctaagttcatgtgaggatca 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5535 tttttcaacggaggcccgcgagcaggaattgggttatgatctaagttcatgtgaggatca 5476 Query: 523 ggcttatgtatatccatatacgttggtgacatgatgccaaatagaatgtacacgaaagga 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5475 ggcttatgtatatccatatacgttggtgacatgatgccaaatagaatgtacacgaaagga 5416 Query: 583 cccgatacaagcactggtaatggtttcaacactagaaacgaatagaatgacattatgcat 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5415 cccgatacaagcactggtaatggtttcaacactagaaacgaatagaatgacattatgcat 5356 Query: 643 aaagtataagctgcattagtccaattgaagatccttattatctcatcaatgatcatgaat 702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5355 aaagtataagctgcattagtccaattgaagatccttattatctcatcaatgatcatgaat 5296 Query: 703 ggggcgccaagcctcgaattcatctgcacgaagttcctactcattatcggcacagacaag 762 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5295 ggggcgccaagcctcgaattcatctgcacgaagttcctactcattatcggcacagacaag 5236 Query: 763 ccaggtcttcctgcacctgcctgtaccctattctctatagtatcagtagccagatcatta 822 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5235 ccaggtcttcctgcacctgcctgtaccctattctctatagtatcagtagccagatcatta 5176 Query: 823 gaggcaggcaatgccatatatataatcttctcaacaagcttgtcatttaaacagctctga 882 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 5175 gaggcaggcaatgccatatatataatcttctcaacaagcttgtcatttaacaggctctga 5116 Query: 883 gtgctttgcgatgggctggtatcagaccgncccg-tgtgctcttcca 928 ||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 5115 gtgctttgcgatgggctggtatcagaccgccccgttgtgctcttcca 5069 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5953 Number of Sequences: 1807 Number of extensions: 5953 Number of successful extensions: 32 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)