BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC12ZG02FM1.SCF screened BAC_end
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1773 1499 0.0
3x_Contig1124 1475 0.0
3x_Contig1790 1467 0.0
3x_Contig1213 1431 0.0
3x_Contig1805 1423 0.0
>3x_Contig1773
Length = 8694
Score = 1499 bits (756), Expect = 0.0
Identities = 784/792 (98%), Gaps = 1/792 (0%)
Strand = Plus / Plus
Query: 88 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgaggaatgcggt 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7023 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgaggaatgcggt 7082
Query: 148 tttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacattttc 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7083 tttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacattttc 7142
Query: 208 aatgcagtgcataaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtca 267
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7143 aatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtca 7202
Query: 268 aagataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccagtc 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7203 aagataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccagtc 7262
Query: 328 cagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatctc 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7263 cagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatctc 7322
Query: 388 attccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaagaag 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7323 attccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaagaag 7382
Query: 448 ctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctctgg 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7383 ctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctctgg 7442
Query: 508 aggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataattca 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7443 aggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataattca 7502
Query: 568 acttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttcat 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7503 acttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttcat 7562
Query: 628 tccgtattatgtataatgatttcgggtgttttgggattttcactgatcatagctcttaga 687
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7563 tccgtattaggtataatgatttcgggtgttttgggattttcactgatcatagctcttaga 7622
Query: 688 cttaatattttcgattgcctttgagttcaacaaccagtatttcttggttatgattccaca 747
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 7623 cttaatattttcgattgccttgaggttcaacaaccagtatttcttggttatgatcccaca 7682
Query: 748 gcctctgtttgagcaattatcttcgcgtgataacatttatcggaggaagtagatcttttg 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7683 gcctctgtttgagcaattatcttcgcgtgataacatttatcggaggaagtagatcttttg 7742
Query: 808 agaaaaaggcttggcaccttcgctacctgatat-cacaaacagtaagcgatgatgacacg 866
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7743 agaaaaaggcttggcacctacgctacctgatatacacaaacagtaagcgatgatgacacg 7802
Query: 867 tagcagttcctt 878
||||||||||||
Sbjct: 7803 tagcagttcctt 7814
>3x_Contig1124
Length = 2635
Score = 1475 bits (744), Expect = 0.0
Identities = 781/792 (98%), Gaps = 1/792 (0%)
Strand = Plus / Plus
Query: 88 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgaggaatgcggt 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1640 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgaggaatgcggt 1699
Query: 148 tttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacattttc 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1700 tttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacattttc 1759
Query: 208 aatgcagtgcataaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtca 267
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1760 aatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtca 1819
Query: 268 aagataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccagtc 327
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1820 aatataacgaagctccggtatgtggctagtcatacctgtgcagaaccatgcagaccagtc 1879
Query: 328 cagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatctc 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1880 cagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatctc 1939
Query: 388 attccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaagaag 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1940 attccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaagaag 1999
Query: 448 ctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctctgg 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2000 ctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctctgg 2059
Query: 508 aggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataattca 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2060 aggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataattca 2119
Query: 568 acttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttcat 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2120 acttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttcat 2179
Query: 628 tccgtattatgtataatgatttcgggtgttttgggattttcactgatcatagctcttaga 687
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2180 tccgtattaggtataatgatttcgggtgttttgggattttcactgatcatagctcttaga 2239
Query: 688 cttaatattttcgattgcctttgagttcaacaaccagtatttcttggttatgattccaca 747
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 2240 cttaatattttcgattgccttgaggttcaacaaccagtatttcttggttatgatcccaca 2299
Query: 748 gcctctgtttgagcaattatcttcgcgtgataacatttatcggaggaagtagatcttttg 807
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2300 gcctctgtttgagcaattatcttcgcgtgataacatgtatcggaggaagtagatcttttg 2359
Query: 808 agaaaaaggcttggcaccttcgctacctgatat-cacaaacagtaagcgatgatgacacg 866
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2360 agaaaaaggcttggcacctacgctacctgatatacacaaacagtaagcgatgatgacacg 2419
Query: 867 tagcagttcctt 878
||||||||||||
Sbjct: 2420 tagcagttcctt 2431
>3x_Contig1790
Length = 27369
Score = 1467 bits (740), Expect = 0.0
Identities = 780/792 (98%), Gaps = 1/792 (0%)
Strand = Plus / Plus
Query: 88 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgaggaatgcggt 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3459 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgaggaatgcggt 3518
Query: 148 tttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacattttc 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3519 tttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacattttc 3578
Query: 208 aatgcagtgcataaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtca 267
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3579 aatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtca 3638
Query: 268 aagataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccagtc 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3639 aagataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccagtc 3698
Query: 328 cagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatctc 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3699 cagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatctc 3758
Query: 388 attccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaagaag 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3759 attccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaagaag 3818
Query: 448 ctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctctgg 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3819 ctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctctgg 3878
Query: 508 aggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataattca 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3879 aggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataattca 3938
Query: 568 acttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttcat 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3939 acttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttcat 3998
Query: 628 tccgtattatgtataatgatttcgggtgttttgggattttcactgatcatagctcttaga 687
||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3999 tccgtattaggtataatgatttgtggtgttttgggattttcactgatcatagctcttaga 4058
Query: 688 cttaatattttcgattgcctttgagttcaacaaccagtatttcttggttatgattccaca 747
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 4059 cttaatattttcgattgccttgaggttcaacaaccagtatttcttggttatgatcccaca 4118
Query: 748 gcctctgtttgagcaattatcttcgcgtgataacatttatcggaggaagtagatcttttg 807
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 4119 gcctctgtttgagcaattatcatcgcgtgataacatgtatcggaggaagtagatcttttg 4178
Query: 808 agaaaaaggcttggcaccttcgctacctgatat-cacaaacagtaagcgatgatgacacg 866
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4179 agaaaaaggcttggcacctacgctacctgatatacacaaacagtaagcgatgatgacacg 4238
Query: 867 tagcagttcctt 878
||||||||||||
Sbjct: 4239 tagcagttcctt 4250
>3x_Contig1213
Length = 3226
Score = 1431 bits (722), Expect = 0.0
Identities = 779/794 (98%), Gaps = 3/794 (0%)
Strand = Plus / Minus
Query: 88 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgagg-aatgcgg 146
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 1677 caagttgtattatcttggcatttctatatctacgtaccttttacatgtgagggaatgcgg 1618
Query: 147 ttttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacatttt 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1617 ttttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacatttt 1558
Query: 207 caatgcagtgcataaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtc 266
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1557 caatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtc 1498
Query: 267 aaaga-taacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccag 325
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1497 aaagaataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccag 1438
Query: 326 tccagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatc 385
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 1437 tccagcgtttattttcgtttcctttttcccttttttgcaacttttgatgttgcctgtatc 1378
Query: 386 tcattccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaaga 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1377 tcattccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaaga 1318
Query: 446 agctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctct 505
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1317 agctgcggggaaagtgtgttcagcttttagacttaattttcacggtactacgtgatctct 1258
Query: 506 ggaggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataatt 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 ggaggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataatt 1198
Query: 566 caacttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttc 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 caacttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttc 1138
Query: 626 attccgtattatgtataatgatttcgggtgttttgggattttcactgatcatagctctta 685
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1137 attccgtattaggtataatgatttggggtgttttgggattttcactgatcatagctctta 1078
Query: 686 gacttaatattttcgattgcctttgagttcaacaaccagtatttcttggttatgattcca 745
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 1077 gacttaatattttcgattgccttgaggttcaacaaccagtatttcttggttatgatccca 1018
Query: 746 cagcctctgtttgagcaattatcttcgcgtgataacatttatcggaggaagtagatcttt 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 cagcctctgtttgagcaattatcttcgcgtgataacatttatcggaggaagtagatcttt 958
Query: 806 tgagaaaaaggcttggcaccttcgctacctgatat-cacaaacagtaagcgatgatgaca 864
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 957 tgagaaaaaggcttggcacctacgctacctgatatacacaaacagtaagcgatgatgaca 898
Query: 865 cgtagcagttcctt 878
||||||||||||||
Sbjct: 897 cgtagcagttcctt 884
>3x_Contig1805
Length = 19369
Score = 1423 bits (718), Expect = 0.0
Identities = 778/794 (97%), Gaps = 3/794 (0%)
Strand = Plus / Minus
Query: 88 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgagg-aatgcgg 146
||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||
Sbjct: 18426 caagttgtattatcttggcatttctatatctacataccttttacatgtgagggaatgcgg 18367
Query: 147 ttttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacatttt 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18366 ttttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacatttt 18307
Query: 207 caatgcagtgcataaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtc 266
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18306 caatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtc 18247
Query: 267 aaaga-taacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccag 325
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18246 aaagaataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccag 18187
Query: 326 tccagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatc 385
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 18186 tccagcgtttattttcgtttcctttttcccttttttgcaacttttgacgttgcctgtatc 18127
Query: 386 tcattccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaaga 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18126 tcattccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaaga 18067
Query: 446 agctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctct 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18066 agctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctct 18007
Query: 506 ggaggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataatt 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18006 ggaggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataatt 17947
Query: 566 caacttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttc 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17946 caacttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttc 17887
Query: 626 attccgtattatgtataatgatttcgggtgttttgggattttcactgatcatagctctta 685
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 17886 attccgtattaggtataatgatttggggtgttttgggattttcactgatcatagctctta 17827
Query: 686 gacttaatattttcgattgcctttgagttcaacaaccagtatttcttggttatgattcca 745
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 17826 gacttaatattttcgattgccttgaggttcaacaaccagtatttcttggttatgatccca 17767
Query: 746 cagcctctgtttgagcaattatcttcgcgtgataacatttatcggaggaagtagatcttt 805
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 17766 cagcctctgtttgagcaattatcatcgcgtgataacatgtatcggaggaagtagatcttt 17707
Query: 806 tgagaaaaaggcttggcaccttcgctacctgatat-cacaaacagtaagcgatgatgaca 864
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 17706 tgagaaaaaggcttggcacctacgctacctgatatacacaaacagtaagcgatgatgaca 17647
Query: 865 cgtagcagttcctt 878
||||||||||||||
Sbjct: 17646 cgtagcagttcctt 17633
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6223
Number of Sequences: 1807
Number of extensions: 6223
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 5
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)