BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZG04RM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1556 1647 0.0 >3x_Contig1556 Length = 10874 Score = 1647 bits (831), Expect = 0.0 Identities = 855/859 (99%), Gaps = 3/859 (0%) Strand = Plus / Minus Query: 48 tgtatactattggaatcc-catcgttcttcagacacagatttgaaatgacatttaataaa 106 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10310 tgtatactattggaatccacatcgttcttcagacacagatttgaaatgacatttaataaa 10251 Query: 107 attatttttatacaacaataaacctaaacatatggagattgtttaaatctaatcttgagt 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10250 attatttttatacaacaataaacctaaacatatggagattgtttaaatctaatcttgagt 10191 Query: 167 cttttgagaaccacgtaacaaaccagttcttctggcagcgatcaaaccagtcttttgacc 226 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10190 cttttgagaaccacgtaacaaaccagttcttctggcagcgatcaaaccagccttttgacc 10131 Query: 227 agaaacagcacctctggagatggtagaagccttaccaatatgttgatggttaccaccacc 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10130 agaaacagcacctctggagatggtagaagccttaccaatatgttgatggttaccaccacc 10071 Query: 287 gtgagggtgatcaacagggttcatggcaacaccacgagtctttggccaagagtttctctt 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10070 gtgagggtgatcaacagggttcatggcaacaccacgagtctttggccaagagtttctctt 10011 Query: 347 gactctgtacttgtggaaagcacgaccagccttcaacaatggcttgtcgattctaccacc 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10010 gactctgtacttgtggaaagcacgaccagccttcaacaatggcttgtcgattctaccacc 9951 Query: 407 accggcaacaacaccaatgacacctctggcatcagaagaaatgatcttcttagcaccaga 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9950 accggcaacaacaccaatgacacctctggcatcagaagaaatgatcttcttagcaccaga 9891 Query: 467 tggtaatctaactctggtcttgttgtcttctgggttgtgaccaataacgataacgtagtt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9890 tggtaatctaactctggtcttgttgtcttctgggttgtgaccaataacgataacgtagtt 9831 Query: 527 accggaagctctggccaaagcacctctgtcacctggtctttcttcgacgttagagatgat 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9830 accggaagctctggccaaagcacctctgtcacctggtctttcttcgacgttagagatgat 9771 Query: 587 agtaccttctgggacggaacccaatggcaaaacgttaccaacgttcaaagaagccttctt 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9770 agtaccttctgggacggaacccaatggcaaaacgttaccaacgttcaaagaagccttctt 9711 Query: 647 accagcgtaaatgaattgaccggtgtggagaccttcgttggcaatgaaggtttcttcacg 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9710 accagcgtaaatgaattgaccggtgtggagaccttcgttggcaatgaaggtttcttcacg 9651 Query: 707 caacttgtacttgtatgggtcacggaagacaaccttagccaaaggagcacctctaccagc 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9650 caacttgtacttgtatgggtcacggaagacaaccttagccaaaggagcacctctaccagc 9591 Query: 767 atcgtggacgatttgcttaac-acaccacgaatgtaaccgtgacgttcagcgtaatccaa 825 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9590 atcgtggacgatttgcttaacaacaccacgaatgtaaccgtgacgttcagcgtaatccaa 9531 Query: 826 gtttctcaacttggcagcaccttgtctcaatctggtgtgagaggtgaagatag-accagc 884 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9530 gtttctcaacttggcagcaccttgtctcaatctggtgtgagaggtgaagatagaaccagc 9471 Query: 885 accctttctttggtttcta 903 ||||||||||||||||||| Sbjct: 9470 accctttctttggtttcta 9452 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6123 Number of Sequences: 1807 Number of extensions: 6123 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)