BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZG11RM1.SCF screened BAC_end (880 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig828 218 1e-56 >3x_Contig828 Length = 2581 Score = 218 bits (110), Expect = 1e-56 Identities = 127/130 (97%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 752 gtgatttacaaggactttcggaattcgtattctgcggtgggaactgaaatttcggtttag 811 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2581 gtgatttacaaggactttcggaattcgtattctgcggtgggaactgaaatttcggtttag 2522 Query: 812 agccgaatctaagtccattaaagggcaaagtattgtccacttcgagt-atgttatgcttg 870 ||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 2521 agccgaatctaggtccattaaagggcaaagtattgtccac-tcgagtaatgttatgcttg 2463 Query: 871 ggagtacaag 880 |||||||||| Sbjct: 2462 ggagtacaag 2453 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6601 Number of Sequences: 1807 Number of extensions: 6601 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 880 length of database: 10,358,551 effective HSP length: 16 effective length of query: 864 effective length of database: 10,329,639 effective search space: 8924808096 effective search space used: 8924808096 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)