BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZH03RM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1106 1626 0.0 >3x_Contig1106 Length = 5510 Score = 1626 bits (820), Expect = 0.0 Identities = 889/902 (98%), Gaps = 8/902 (0%) Strand = Plus / Minus Query: 40 caattaagaagaaagctattacaaaatttaacgctttatgacaaattatcaaaaagcatt 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3437 caattaagaagaaagctattacaaaatttaacgctttatgacaaattatcaaaaagcatt 3378 Query: 100 gttcagttggatacaaaatcaacagcagagaagaaaatacaacagtcaattgccctacat 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3377 gttcagttggatacaaaatcaacagcagagaagaaaatacaacagtcaattgccctacat 3318 Query: 160 gcatcagcgttcatcgaggagaaaatgctacccttgaaaaaaataccagaaatcttgaac 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3317 gcatcagcgttcatcgaggagaaaatgctacccttgaaaaaaataccagaaatcttgaac 3258 Query: 220 cctgtgtcacagaaagtagaagtcacaacatcatcggatcttttgttcaataatttaaca 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3257 cctgtgtcacagaaagtagaagtcacaacatcatcggatcttttgttcaataatttaaca 3198 Query: 280 attgcggaagtaaagaagtacagagaagaacttatggttttgaatgaacaacgatactta 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3197 attgcggaagtaaagaagtacagagaagaacttatggttttgaatgaacaacgatactta 3138 Query: 340 gtcgaaaatatgcttaattcagctgccaaggaaaggcgcttcgaggaagcgatatccttg 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3137 gtcgaaaatatgcttaattcagctgccaaggaaaggcgcttcgaggaagcgatatccttg 3078 Query: 400 aaaactaatctttcagaaattgatcagaacatagtgcatttagaaagtaagctaggtgat 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3077 aaaactaatctttcagaaattgatcagaacatagtgcatttagaaagtaagctaggtgat 3018 Query: 460 gaaggcttttaaaattattatttaacactcaattaggtgtatattctattgaaccatata 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3017 gaaggcttttaaaattattatttaacactcaattaggtgtatattctattgaaccatata 2958 Query: 520 aacactcttctatcacaagcacgataatataaatgcaa-ccaaaactctat-ccgtttcg 577 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 2957 aacactcttctatcacaagcacgataatataaatgcaacccaaaactctatcccgtttcg 2898 Query: 578 ctctgtaacttattgtcgagatgccagtatgagaaagccctttgaataaaaaaaaaatcc 637 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2897 ctctgtaacttattgtcgagatgccagtatgagaaagccctttgaataaaaaaaaaatcc 2838 Query: 638 tgtgaaatgttaattctaccaaagtcatcgaacaaaagttctgttgaaatcacgtcacag 697 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2837 tgtgaaatgttaattctaccaaagtcatcgaacaaaagttctgttgaaatcacgtcacag 2778 Query: 698 cgacagcaagaactntacgcaccgactttgaacctatccaatcgtcanataacataatga 757 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2777 cgacagcaagaactttacgcaccgactttgaacctatccaatcgtcaaataacataatga 2718 Query: 758 acgtatgtgtacgcttttaagtggtcgagagttttcgagaatactaacagaaagccttgc 817 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2717 acgtatgtgtacgcttttaagtggtcgagagttttcgagaatactaacagaaagccttgc 2658 Query: 818 ttttatggattgaa-ttgtgtttagaatgaatggagatc-agcttgaatgaaa-taacag 874 |||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 2657 ttttatggattgaatttgtgtttagaatgaatggagatcaagcttgaatgaaattaacag 2598 Query: 875 tattgcgtggaaccggga-tgacttattccttgataaagcc-agaaacttgattctagta 932 ||| |||||| ||||||| |||| |||||| |||||||||| |||||||||||||||||| Sbjct: 2597 tatggcgtgg-accgggattgacgtattccctgataaagccaagaaacttgattctagta 2539 Query: 933 tt 934 || Sbjct: 2538 tt 2537 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9035 Number of Sequences: 1807 Number of extensions: 9035 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)