BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC12ZH05FM1.SCF screened BAC_end
         (935 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1754                                                        1631   0.0  

>3x_Contig1754 
          Length = 26052

 Score = 1631 bits (823), Expect = 0.0
 Identities = 843/850 (99%)
 Strand = Plus / Plus

                                                                         
Query: 86    atccttagatttggtaattacagatctatcattttgatcagatgatcccttatttacatt 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21176 atccttagatttggtaattacagatctatcattttgatcagatgatcccttatttacatt 21235

                                                                         
Query: 146   catactcaatgaaagctgctgctttctgcttgctggtatgtcaaatatctgaatctatgg 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21236 catactcaatgaaagctgctgctttctgcttgctggtatgtcaaatatctgaatctatgg 21295

                                                                         
Query: 206   ttgtttctctctacgtatcaatttcaatgtctataaaaaatacctaaatttgaagaagca 265
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21296 ttgtttctctctacgtatcaatttcaatgtctataaaaaatacctaaatttgaagaagca 21355

                                                                         
Query: 266   ttccatagagtaaaatgagatcgaaaaaaaaagaacggcatgcaacaatcatataactac 325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21356 ttccatagagtaaaatgagatcgaaaaaaaaagaacggcatgcaacaatcatataactac 21415

                                                                         
Query: 326   tacaaatgccgagtttattccacaacatcactgaaatattctgaaatatcaaaatcaaca 385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21416 tacaaatgccgagtttattccacaacatcactgaaatattctgaaatatcaaaatcaaca 21475

                                                                         
Query: 386   ctgccagccactagtaatatgtaatcccaagtgacgttaactttaaacttaagtctttcg 445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21476 ctgccagccactagtaatatgtaatcccaagtgacgttaactttaaacttaagtctttcg 21535

                                                                         
Query: 446   tgaagataccccaatttgtgcatgttcagaccggtaagaagttgagaagtaatcaattcg 505
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21536 tgaagataccccaatttgtgcatgttcagaccggtaagaagttgagaagtaatcaattcg 21595

                                                                         
Query: 506   gacacgttttcgtagacttccacatttgctttcatatgaacatctctttgaaagaaatct 565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21596 gacacgttttcgtagacttccacatttgctttcatatgaacatctctttgaaagaaatct 21655

                                                                         
Query: 566   ggagacaattccttcgaaactctgactgggtatatcgattggaaaattgccagcattctc 625
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21656 ggagacaattccttcgaaactctgactgggtatatcgattggaaaattgccagcattctc 21715

                                                                         
Query: 626   tcaagagaaaagcctgatggttgaaggtatctcgggttattcgctggtttgcttcttctc 685
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21716 tcaagagaaaagcctgatggttgaaggtatctcgggttattcgctggtttgcttcttctc 21775

                                                                         
Query: 686   ccataagatgatctacccccccttagatgactcttcttggagaagactttagagtcgtac 745
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21776 ccataagatgatctacccccccttagatgactcttcttggagaagactttagagtcgtac 21835

                                                                         
Query: 746   cgatgattcaaatatgatgccaaatatgcggctattagaagatattttgccatgaaacaa 805
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21836 cgatgattcaaatatgatgccaaatatgcggctattagaagatattttgccatgaaacaa 21895

                                                                         
Query: 806   agagaatggctttgattaccaacagacccggtaccacttagtgaattttgattcgaacgg 865
             ||||||||||||  || ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 21896 agagaatggcttgaataaccaacagacccggtaccacttagtgaattttgatccgaacgg 21955

                                                                         
Query: 866   ctggtttgtggtattagtctttcgttaggtttattgaatagcttcaggttagatttgtat 925
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 21956 ctggtttgtggtattagtctttcgttaggtttattgaatagctccaggttagatttgtat 22015

                       
Query: 926   tactgnactg 935
              |||| ||||
Sbjct: 22016 aactgtactg 22025


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7974
Number of Sequences: 1807
Number of extensions: 7974
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 935
length of database: 10,358,551
effective HSP length: 16
effective length of query: 919
effective length of database: 10,329,639
effective search space: 9492938241
effective search space used: 9492938241
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)