BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZH05RM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1680 1631 0.0 >3x_Contig1680 Length = 12597 Score = 1631 bits (823), Expect = 0.0 Identities = 873/885 (98%), Gaps = 5/885 (0%) Strand = Plus / Plus Query: 48 tggaagaac-aggtgctggtgaccaaggtatcatgttcggttatgctactgacgaaaccc 106 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5517 tggaagaactaggtgctggtgaccaaggtatcatgttcggttatgctactgacgaaaccc 5576 Query: 107 cagaacatttgccattgaccattttgttggcccacaagttgaacatggctatggctgatg 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5577 cagaacatttgccattgaccattttgttggcccacaagttgaacatggctatggctgatg 5636 Query: 167 ccagaagagacggttctttgccatgggttagacctgataccaagactcattttaccgttg 226 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 5637 ccagaagagacggttctttgccatgggttagacctgataccaagactcaagttaccgttg 5696 Query: 227 aatacaaggaagataatggtagatggatcccattgagaatcgacaccatcgttatctctg 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5697 aatacaaggaagataatggtagatggatcccattgagaatcgacaccatcgttatctctg 5756 Query: 287 ctcaacacgccgaagaaatcagcactgctgatttgcgtcaatctctaagaactaacatca 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5757 ctcaacacgccgaagaaatcagcactgctgatttgcgtcaatctctaagaactaacatca 5816 Query: 347 tcgacaaggtttgtccagccgagatgttggatgaaaacaccaagtactacatccaaccat 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5817 tcgacaaggtttgtccagccgagatgttggatgaaaacaccaagtactacatccaaccat 5876 Query: 407 ctggtagattcgttatcggtggtcctcaaggtgatgccggtttgactggtagaaagatta 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5877 ctggtagattcgttatcggtggtcctcaaggtgatgccggtttgactggtagaaagatta 5936 Query: 467 tcgtcgatgcttacggtggtgcttctgctgtcggtggtggtgctttctccggtaaggatt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5937 tcgtcgatgcttacggtggtgcttctgctgtcggtggtggtgctttctccggtaaggatt 5996 Query: 527 actccaaggtcgaccgttccgctgcttacgccgctagatgggttgctaagtctttggtcc 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5997 actccaaggtcgaccgttccgctgcttacgccgctagatgggttgctaagtctttggtcc 6056 Query: 587 acgctggtatctgtaagagagttcaagtccaattctcttacgctatcggtatcgctgaac 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6057 acgctggtatctgtaagagagttcaagtccaattctcttacgctatcggtatcgctgaac 6116 Query: 647 ctttatccttgcatgtcgacacctatggtaccgctaccatcccagatgaagaagttattg 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6117 ctttatccttgcatgtcgacacctatggtaccgctaccatcccagatgaagaagttattg 6176 Query: 707 aaatcatcaagaagaacttcgacttgagacctggtgtccttgtgaaggaattagatttgg 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6177 aaatcatcaagaagaacttcgacttgagacctggtgtccttgtgaaggaattagatttgg 6236 Query: 767 ctagaccaatctacttgccaaccgctttctacggtcactttactaaccaagaatacccat 826 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 6237 ctagaccaatctacttgccaaccgc-ttctacggtcacttcactaaccaagaatacccat 6295 Query: 827 gggaaaagccaaa-gctttgtagttgtaagtttgaagctatattgaacaaaaa--caaac 883 ||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 6296 gggaaaagccaaaggctttgaagttgtaagtttgaagctatattgaacaaaaaacaaaac 6355 Query: 884 ataacgtactgttagatttncggtctttctccttctacttctttc 928 ||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 6356 ataacgtactgttagatttccgttctttctccttctacttctttc 6400 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6074 Number of Sequences: 1807 Number of extensions: 6074 Number of successful extensions: 44 Number of sequences better than 1.0e-20: 1 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)