BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZA01RM1.SCF screened BAC_end (910 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig782 1681 0.0 >3x_Contig782 Length = 2529 Score = 1681 bits (848), Expect = 0.0 Identities = 850/851 (99%) Strand = Plus / Minus Query: 49 acagaatgcataaggaagctttattcgtggcatgtttcattgccgatgatgctatcgcca 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2201 acagaatgcataaggaagctttattcgtggcatgtttcattgccgatgatgctatcgcca 2142 Query: 109 agaataccatagatttgttgctaagctcagaaattttgtatttcacctccaatgatatta 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2141 agaataccatagatttgttgctaagctcagaaattttgtatttcacctccaatgatatta 2082 Query: 169 aaccaattttggaaagattacagatttcagctccaataatccatcgtcatctggcactat 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2081 aaccaattttggaaagattacagatttcagctccaataatccatcgtcatctggcactat 2022 Query: 229 acgagaagtactctggcgaccatctttccgaagtaagtaatttgttgaaagcaggcgact 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2021 acgagaagtactctggcgaccatctttccgaagtaagtaatttgttgaaagcaggcgact 1962 Query: 289 ttaaggaggcggaactagtcaccattactaccgtaggtccaaagttaataatcaatgcca 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1961 ttaaggaggcggaactagtcaccattactaccgtaggtccaaagttaataatcaatgcca 1902 Query: 349 aatggaataacgattacttatcagttttggaaacactgttgcaaaggtttccttcgcaca 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1901 aatggaataacgattacttatcagttttggaaacactgttgcaaaggtttccttcgcaca 1842 Query: 409 ccatcccaacttgggaaaaaggattgggtgtatatgaaaagtacatcaagctctcactac 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1841 ccatcccaacttgggaaaaaggattgggtgtatatgaaaagtacatcaagctctcactac 1782 Query: 469 acaactccctcgatcctaatatcatccatcagcttatcaacacattacccaacctatgca 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1781 acaactccctcgatcctaatatcatccatcagcttatcaacacattacccaacctatgca 1722 Query: 529 aagactattcacatcatgaattagtgaacgttgcaagctctcgtatctctgaggctgtca 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1721 aagactattcacatcatgaattagtgaacgttgcaagctctcgtatctctgaggctgtca 1662 Query: 589 gtgaattgtttttgatcaacctcaacatgttatcaagaaaaatcccaaaagagagcctgc 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1661 gtgaattgtttttgatcaacctcaacatgttatcaagaaaaatcccaaaagagagcctgc 1602 Query: 649 tttctttaccattaggtcaaccggaatcaaattacttaaagaaagtgttgtcctcattgt 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1601 tttctttaccattaggtcaaccggaatcaaattacttaaagaaagtgttgtcctcattgt 1542 Query: 709 gaaaacctgtattataagtatataaatgattacaacaaaatattaaacgataaaagtaca 768 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1541 gaaaacctgtattataagtatataaatgattacaacaaaatattaaacgataaaagtaca 1482 Query: 769 taatatagaaggatatcatgaaagttcagaacccatttcaagaacttttcggatgcaaat 828 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1481 taatatagaaggatatcatgaaagttcagaacccatttcaagaacttttcggatgcaaat 1422 Query: 829 tagtattattctttgactttagacatcgnctaccgcgtcgcgtaacgattcaatgacctc 888 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1421 tagtattattctttgactttagacatcgcctaccgcgtcgcgtaacgattcaatgacctc 1362 Query: 889 gagtatcgcgg 899 ||||||||||| Sbjct: 1361 gagtatcgcgg 1351 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6676 Number of Sequences: 1807 Number of extensions: 6676 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 910 length of database: 10,358,551 effective HSP length: 16 effective length of query: 894 effective length of database: 10,329,639 effective search space: 9234697266 effective search space used: 9234697266 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)