BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZA03FM1.SCF screened BAC_end (965 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1174 1455 0.0 >3x_Contig1174 Length = 6106 Score = 1455 bits (734), Expect = 0.0 Identities = 824/844 (97%), Gaps = 9/844 (1%) Strand = Plus / Plus Query: 87 ttagagtctgagcaacaatacttcgaaatgttgagtctatgtttatcaacttacaaggaa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1851 ttagagtctgagcaacaatacttcgaaatgttgagtctatgtttatcaacttacaaggaa 1910 Query: 147 gaagcatgccacaacaagaaatttaggaacaaattgttgaatagagcttcaaacgatgag 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1911 gaagcatgccacaacaagaaatttaggaacaaattgttgaatagagcttcaaacgatgag 1970 Query: 207 ctattgttgtttgtttttttagatacgatggcagagttaagtaaattattctgcaaaaat 266 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1971 ctattgttgtttgggaatttagatacgatggcagagttaagtaaattattctgcaaaaat 2030 Query: 267 ttatcagaatgcttgaaagtgacagatgctggtactcagagcaggatttggaaggaaatt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2031 ttatcagaatgcttgaaagtgacagatgctggtactcagagcaggatttggaaggaaatt 2090 Query: 327 aaagggagtgacaagttatgtcaaattatacttgatactgatttctctacgttgataaaa 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2091 aaagggagtgacaagttatgtcaaattatacttgatactgatttctctacgttgataaaa 2150 Query: 387 tctcatttacatagaatcaagtccccatatcatagctactgcatctgtcatgaggaaagg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2151 tctcatttacatagaatcaagtccccatatcatagctactgcatctgtcatgaggaaagg 2210 Query: 447 aaacgatttctagactcgatcaaattgcaaaacacggaaacgttttacaagtggtacgag 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2211 aaacgatttctagactcgatcaaattgcaaaacacggaaacgttttacaagtggtacgag 2270 Query: 507 ttatgcttaaaaaaatcacaatttgagaagttagaagacctcttggagttgccattggag 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2271 ttatgcttaaaaaaatcacaatttgagaagttagaagacctcttggagttgccattggag 2330 Query: 567 aggctaggccaatgggggtcattgttcgagaacttatgtttatttggtgacaatttgcta 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2331 aggctaggccaatgggggtcattgttcgagaacttatgtttatttggtgacaatttgcta 2390 Query: 627 tcaccagaacggtctgttcagatgaatgcgatatcaaaagaatacattagttatctaagg 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2391 tcaccagaacggtctgttcagatgaatgcgatatcaaaagaatacattagttatctaagg 2450 Query: 687 gatctaaacgatgaactaaataattccggacgtgcaaaggaaagcattttaggagaagaa 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2451 gatctaaacgatgaactaaataattccggacgtgcaaaggaaagcattttaggagaagaa 2510 Query: 747 aatgcggtgactcaagaaaaggagaaatgac-acatttcttcaaaatctggatcccgtgg 805 |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 2511 aatgcggtgactcaagaaaaggag-aatgacaacatttcttcaaaatctggatcccgtgg 2569 Query: 806 aggttcacaaatttccaaatcatctagttttttatttagatatcccatcatttttacaga 865 ||||||||||||||||||||||||||| |||||||| |||||||||||||||| | ||| Sbjct: 2570 aggttcacaaatttccaaatcatctag-tttttattcagatatcccatcatttaca-aga 2627 Query: 866 gttgaagaagaagttcccacaggggagaaccaacaaggcgcggttccctncacaattcac 925 || |||||||||| | ||||| ||||||||||| ||||||||| ||| |||||||||| Sbjct: 2628 gtagaagaagaag-taccaca-aggagaaccaac-aggcgcggt--cctccacaattcac 2682 Query: 926 attt 929 |||| Sbjct: 2683 attt 2686 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7832 Number of Sequences: 1807 Number of extensions: 7832 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 965 length of database: 10,358,551 effective HSP length: 16 effective length of query: 949 effective length of database: 10,329,639 effective search space: 9802827411 effective search space used: 9802827411 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)