BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC13ZA03FM1.SCF screened BAC_end
         (965 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1174                                                        1455   0.0  

>3x_Contig1174 
          Length = 6106

 Score = 1455 bits (734), Expect = 0.0
 Identities = 824/844 (97%), Gaps = 9/844 (1%)
 Strand = Plus / Plus

                                                                        
Query: 87   ttagagtctgagcaacaatacttcgaaatgttgagtctatgtttatcaacttacaaggaa 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1851 ttagagtctgagcaacaatacttcgaaatgttgagtctatgtttatcaacttacaaggaa 1910

                                                                        
Query: 147  gaagcatgccacaacaagaaatttaggaacaaattgttgaatagagcttcaaacgatgag 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1911 gaagcatgccacaacaagaaatttaggaacaaattgttgaatagagcttcaaacgatgag 1970

                                                                        
Query: 207  ctattgttgtttgtttttttagatacgatggcagagttaagtaaattattctgcaaaaat 266
            |||||||||||||    |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1971 ctattgttgtttgggaatttagatacgatggcagagttaagtaaattattctgcaaaaat 2030

                                                                        
Query: 267  ttatcagaatgcttgaaagtgacagatgctggtactcagagcaggatttggaaggaaatt 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2031 ttatcagaatgcttgaaagtgacagatgctggtactcagagcaggatttggaaggaaatt 2090

                                                                        
Query: 327  aaagggagtgacaagttatgtcaaattatacttgatactgatttctctacgttgataaaa 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2091 aaagggagtgacaagttatgtcaaattatacttgatactgatttctctacgttgataaaa 2150

                                                                        
Query: 387  tctcatttacatagaatcaagtccccatatcatagctactgcatctgtcatgaggaaagg 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2151 tctcatttacatagaatcaagtccccatatcatagctactgcatctgtcatgaggaaagg 2210

                                                                        
Query: 447  aaacgatttctagactcgatcaaattgcaaaacacggaaacgttttacaagtggtacgag 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2211 aaacgatttctagactcgatcaaattgcaaaacacggaaacgttttacaagtggtacgag 2270

                                                                        
Query: 507  ttatgcttaaaaaaatcacaatttgagaagttagaagacctcttggagttgccattggag 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2271 ttatgcttaaaaaaatcacaatttgagaagttagaagacctcttggagttgccattggag 2330

                                                                        
Query: 567  aggctaggccaatgggggtcattgttcgagaacttatgtttatttggtgacaatttgcta 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2331 aggctaggccaatgggggtcattgttcgagaacttatgtttatttggtgacaatttgcta 2390

                                                                        
Query: 627  tcaccagaacggtctgttcagatgaatgcgatatcaaaagaatacattagttatctaagg 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2391 tcaccagaacggtctgttcagatgaatgcgatatcaaaagaatacattagttatctaagg 2450

                                                                        
Query: 687  gatctaaacgatgaactaaataattccggacgtgcaaaggaaagcattttaggagaagaa 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2451 gatctaaacgatgaactaaataattccggacgtgcaaaggaaagcattttaggagaagaa 2510

                                                                        
Query: 747  aatgcggtgactcaagaaaaggagaaatgac-acatttcttcaaaatctggatcccgtgg 805
            |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 2511 aatgcggtgactcaagaaaaggag-aatgacaacatttcttcaaaatctggatcccgtgg 2569

                                                                        
Query: 806  aggttcacaaatttccaaatcatctagttttttatttagatatcccatcatttttacaga 865
            ||||||||||||||||||||||||||| |||||||| ||||||||||||||||  | |||
Sbjct: 2570 aggttcacaaatttccaaatcatctag-tttttattcagatatcccatcatttaca-aga 2627

                                                                        
Query: 866  gttgaagaagaagttcccacaggggagaaccaacaaggcgcggttccctncacaattcac 925
            || |||||||||| | |||||  ||||||||||| |||||||||  ||| ||||||||||
Sbjct: 2628 gtagaagaagaag-taccaca-aggagaaccaac-aggcgcggt--cctccacaattcac 2682

                
Query: 926  attt 929
            ||||
Sbjct: 2683 attt 2686


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7832
Number of Sequences: 1807
Number of extensions: 7832
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 965
length of database: 10,358,551
effective HSP length: 16
effective length of query: 949
effective length of database: 10,329,639
effective search space: 9802827411
effective search space used: 9802827411
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)