BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC13ZA05FM1.SCF screened BAC_end
         (914 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1647                                                        1532   0.0  

>3x_Contig1647 
          Length = 14353

 Score = 1532 bits (773), Expect = 0.0
 Identities = 811/820 (98%), Gaps = 3/820 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   tctcacggtgataattttgttccaatttgggtcgctttgggattagcagtttctctaact 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4553 tctcacggtgataattttgttccaatttgggtcgctttgggattagcagtttctctaact 4612

                                                                        
Query: 147  ttagtttgcgccttccttatgtctgaatctagacatgaaatggccaggttaaagtcccaa 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4613 ttagtttgcgccttccttatgtctgaatctagacatgaaatggccaggttaaagtcccaa 4672

                                                                        
Query: 207  actaagttcttgtgtttaagggagagcatcaatagtgccagatcacggcaatcagatatg 266
            ||||||||| || |   |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4673 actaagttcctgagacgaagggagagcatcaatagtgccagatcacggcaatcagatatg 4732

                                                                        
Query: 267  gcaggtggagccaatcggtcatatacagtactgaaatatactgctctacaattcttcgac 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4733 gcaggtggagccaatcggtcatatacagtactgaaatatactgctctacaattcttcgac 4792

                                                                        
Query: 327  tttttgtctccagtgagaaatttatggattgctcctactgccgccggttccttggttcca 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4793 tttttgtctccagtgagaaatttatggattgctcctactgccgccggttccttggttcca 4852

                                                                        
Query: 387  agatacatggttttattgcttgttggaatagatatcatgtttgtcatatctacagcggca 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4853 agatacatggttttattgcttgttggaatagatatcatgtttgtcatatctacagcggca 4912

                                                                        
Query: 447  tctataccggcgattgttttagcctttgttttcatgttcggttggagttcagagcaatta 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4913 tctataccggcgattgttttagcctttgttttcatgttcggttggagttcagagcaatta 4972

                                                                        
Query: 507  ggttactttgtgtctttaatgggactcggcaaggctgctgctttattagttctcgcaccg 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4973 ggttactttgtgtctttaatgggactcggcaaggctgctgctttattagttctcgcaccg 5032

                                                                        
Query: 567  ctggcactacatcttttgaagaaacgattcaaaacgttatcaaaatctgtggaccacaca 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5033 ctggcactacatcttttgaagaaacgattcaaaacgttatcaaaatctgtggaccacaca 5092

                                                                        
Query: 627  gacatggttgtactacgtgtttcttccttttttattctactttcgctagtagtattagtg 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5093 gacatggttgtactacgtgtttcttccttttttattctactttcgctagtagtattagtg 5152

                                                                        
Query: 687  attagtcgaagtgaatccgctgcatacgtatacgttctcctacaaatactgngaagcatg 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 5153 attagtcgaagtgaatccgctgcatacgtatacgttctcctacaaatactgggaagcatg 5212

                                                                        
Query: 747  ctatccccaacagtgcaatccacagttatcaaatacggatcgaaaagttctacaggtgag 806
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5213 ctatccccaacagtgcaatccacagttatcaaatacggatcgaaaagttctacaggtgag 5272

                                                                        
Query: 807  ttatttggtgcaatggcattaattatgaag-tgtgcaatgatggtaatgccatcgttatt 865
            ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 5273 ttatttggtgcaatggcattaatta-gaagttgtgcaatgatggtaatgccatcgttatt 5331

                                                    
Query: 866  tttgaaattgtattcgagaacagtgaattttggacccctt 905
            ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5332 tttgaaattgtattcgagaacagtgaa-tttggacccctt 5370


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5611
Number of Sequences: 1807
Number of extensions: 5611
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)