BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZA12RM1.SCF screened BAC_end (946 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1522 1653 0.0 >3x_Contig1522 Length = 7810 Score = 1653 bits (834), Expect = 0.0 Identities = 890/906 (98%), Gaps = 2/906 (0%) Strand = Plus / Minus Query: 42 gcttttattttagataaacaaatctttcaatcctctaattccgtcccgctggtcatcttt 101 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 6387 gcttttattttagataaacaaatcgaacaatcctctaattccgtcccgctggtcatcttt 6328 Query: 102 tgcaaggctttcatcttttgaatagcttctttattgaatgcattagctttccttctccaa 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6327 tgcaaggctttcatcttttgaatagcttctttattgaatgcattagctttccttctccaa 6268 Query: 162 gatttattgatctccactctcattttaacacacctgtaaatttcttccgcaccacctcgg 221 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 6267 gatttattgagctccactctcattttaacacacctgtaaatttcttccgcaccaccccgg 6208 Query: 222 aagtctaatccgagttgtaatatatcgccgtcctttaacagaaaatccttggacatagta 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6207 aagtctaatccgagttgtaatatatcgccgtcctttaacagaaaatccttggacatagta 6148 Query: 282 gctggctgagaaagtctttgatgattcaagaacgtccctgatgatgatttgacatctttc 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6147 gctggctgagaaagtctttgatgattcaagaacgtccctgatgatgatttgacatctttc 6088 Query: 342 acaaaccaatttccattatcgtcaactttgaaaacaccatgtgtccttgagacgacttta 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6087 acaaaccaatttccattatcgtcaactttgaaaacaccatgtgtccttgagacgacttta 6028 Query: 402 ctcttgaatacggctggatggaacggttcgggaatagaagaaatggcctctctgaccttt 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6027 ctcttgaatacggctggatggaacggttcgggaatagaagaaatggcctctctgaccttt 5968 Query: 462 tctgtgtaccttccgattaccaactgagaaccaggaccagcagttcttatgatcggatca 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5967 tctgtgtaccttccgattaccaactgagaaccaggaccagcagttcttatgatcggatca 5908 Query: 522 aaatagaaaccggggttaccagccgatgagttgtctataaatgcggtcaatcttaaagtg 581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5907 aaatagaaaccggggttaccagccgatgagttgtctataaatgcggtcaatcttaaagtg 5848 Query: 582 aataatccgtttttatccttacgatttctaacagtttcatcatctgcagcttccggctgg 641 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5847 aataatccgtttttatccttacgatttctaacagtttcatcatctgcagcttccggctgg 5788 Query: 642 gcccaatcaggtgcaaagtctagatgcaacgatggcgctgatgctggccttactgctggg 701 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5787 gcccaatcaggtgcaaagtctagatgcaacgatggcgctgatgctggccttactgctggg 5728 Query: 702 tatatgaaatgatgaacgtttttcagagcttgaccgttttgagggatggtaccgtgtata 761 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5727 tatatgaaatgatgaacgtttttcagagcttgaccgttttgagggatggtaccgtgtata 5668 Query: 762 ggaggggaagtgagcgggatatgatgaatatccgttgtgttattaccaccatttccatta 821 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 5667 ggaggggaagtgagcgggatatgatgaatatcgtttgtgttattaccaccatttccatta 5608 Query: 822 gtctcaatttgt-ccaatacaagattgatcggtaaatgatttcccgttcatgcactatca 880 |||||||||||| ||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 5607 gtctcaatttgtcccaatacaagattgatcggtaaatgatttcctgtcagtgcactatca 5548 Query: 881 ccaactgttgcagaaagagctcctgtcaactgcgtatggtggctcagacgaattaaacgg 940 ||||||| |||||||||||||||||||||||||| ||||| |||||||||||| |||||| Sbjct: 5547 ccaactggtgcagaaagagctcctgtcaactgcg-atggttgctcagacgaatcaaacgg 5489 Query: 941 ggttgt 946 |||||| Sbjct: 5488 ggttgt 5483 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6635 Number of Sequences: 1807 Number of extensions: 6635 Number of successful extensions: 44 Number of sequences better than 1.0e-20: 1 length of query: 946 length of database: 10,358,551 effective HSP length: 16 effective length of query: 930 effective length of database: 10,329,639 effective search space: 9606564270 effective search space used: 9606564270 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)