BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZB02RM1.SCF screened BAC_end (938 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1698 1697 0.0 >3x_Contig1698 Length = 21001 Score = 1697 bits (856), Expect = 0.0 Identities = 881/887 (99%), Gaps = 2/887 (0%) Strand = Plus / Minus Query: 44 cttggatccacatttataactaaatatgggcccgccttcaaatgttttacgttatataaa 103 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3662 cttggatccacatttataactaaaaatgggcccgccttcaaatgttttacgttatataaa 3603 Query: 104 ccgacttcatggttctcagggttaccaatggcgaacacaagcccgcttggatcgtaagca 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3602 ccgacttcatggttctcagggttaccaatggcgaacacaagcccgcttggatcgtaagca 3543 Query: 164 atgcatgtggggactaaacttggtataagggcctgtgccttggagcttctcaaatcc-aa 222 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 3542 atgcatgtggggactaaacttggtataagggcctgtgccttggagcttctcaaatcccaa 3483 Query: 223 agtcttaccgattcgtcatacgatgcagacaaaaaagtatcatccaacggggacatttgt 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3482 agtcttaccgattcgtcatacgatgcagacaaaaaagtatcatccaacggggacatttgt 3423 Query: 283 atatcgctcactagagcaccatggccctggaaatatctaaggtatgtgtttgtttcaaga 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3422 atatcgctcactagagcaccatggccctggaaatatctaaggtatgtgtttgtttcaaga 3363 Query: 343 ttcaaatgccttatgtcaaacgatttcatagtggatgaatagatacattctgattgcgca 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3362 ttcaaatgccttatgtcaaacgatttcatagtggatgaatagatacattctgattgcgca 3303 Query: 403 tgtgtaaactttgcggaatgacatccgtattttttagaagcgatggtattcaaaaacctg 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3302 tgtgtaaactttgcggaatgacatccgtattttttagaagcgatggtattcaaaaacctg 3243 Query: 463 caacttactgcatcatatagatgcatattatcactagcagttgcagtcaacaagtactgg 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3242 caacttactgcatcatatagatgcatattatcactagcagttgcagtcaacaagtactgg 3183 Query: 523 ccatggtcatcaaatgtcactgaagttataggtcccaattctttatcagaaactctgaag 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3182 ccatggtcatcaaatgtcactgaagttataggtcccaattctttatcagaaactctgaag 3123 Query: 583 gacttcacaggctcaaatcgtagaagattgctcttggaaatgctaacagtcatatttcct 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3122 gacttcacaggctcaaatcgtagaagattgctcttggaaatgctaacagtcatatttcct 3063 Query: 643 ttctcagctaacttttagataatcacagaactgttgctaaaccgctggtgtcccgttgag 702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3062 ttctcagctaacttttagataatcacagaactgttgctaaaccgctggtgtcccgttgag 3003 Query: 703 cttctctttttgtctccaaattggtaatatttcttgatggtgttaacagttttatttaaa 762 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3002 cttctctttttgtctccaaattggtaatatttcttgatggtgttaacagttttatttaaa 2943 Query: 763 tttaaatgttcctcgaaattgtaatgacatctgtcaaagaaatcaatagtgttagtcact 822 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2942 tttaaatgttcctcgaaattgtaatgacatctgtcaaagaaatcaatagtgttagtcact 2883 Query: 823 tgcaggtagagaaatagagcctttctggtcttactctggctttataaag-actgacatat 881 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2882 tgcaggtagagaaatagagcctttctggtcttactctggctttataaagaactgacatat 2823 Query: 882 ttgagaantgtaataaggatcatgggtgtacgtaccgttcatttttt 928 |||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 2822 ttgagatttgtaataagaatcatgggtgtacgtaccgttcatttttt 2776 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6558 Number of Sequences: 1807 Number of extensions: 6558 Number of successful extensions: 28 Number of sequences better than 1.0e-20: 1 length of query: 938 length of database: 10,358,551 effective HSP length: 16 effective length of query: 922 effective length of database: 10,329,639 effective search space: 9523927158 effective search space used: 9523927158 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)