BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC13ZB02RM1.SCF screened BAC_end
         (938 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1698                                                        1697   0.0  

>3x_Contig1698 
          Length = 21001

 Score = 1697 bits (856), Expect = 0.0
 Identities = 881/887 (99%), Gaps = 2/887 (0%)
 Strand = Plus / Minus

                                                                        
Query: 44   cttggatccacatttataactaaatatgggcccgccttcaaatgttttacgttatataaa 103
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3662 cttggatccacatttataactaaaaatgggcccgccttcaaatgttttacgttatataaa 3603

                                                                        
Query: 104  ccgacttcatggttctcagggttaccaatggcgaacacaagcccgcttggatcgtaagca 163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3602 ccgacttcatggttctcagggttaccaatggcgaacacaagcccgcttggatcgtaagca 3543

                                                                        
Query: 164  atgcatgtggggactaaacttggtataagggcctgtgccttggagcttctcaaatcc-aa 222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 3542 atgcatgtggggactaaacttggtataagggcctgtgccttggagcttctcaaatcccaa 3483

                                                                        
Query: 223  agtcttaccgattcgtcatacgatgcagacaaaaaagtatcatccaacggggacatttgt 282
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3482 agtcttaccgattcgtcatacgatgcagacaaaaaagtatcatccaacggggacatttgt 3423

                                                                        
Query: 283  atatcgctcactagagcaccatggccctggaaatatctaaggtatgtgtttgtttcaaga 342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3422 atatcgctcactagagcaccatggccctggaaatatctaaggtatgtgtttgtttcaaga 3363

                                                                        
Query: 343  ttcaaatgccttatgtcaaacgatttcatagtggatgaatagatacattctgattgcgca 402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3362 ttcaaatgccttatgtcaaacgatttcatagtggatgaatagatacattctgattgcgca 3303

                                                                        
Query: 403  tgtgtaaactttgcggaatgacatccgtattttttagaagcgatggtattcaaaaacctg 462
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3302 tgtgtaaactttgcggaatgacatccgtattttttagaagcgatggtattcaaaaacctg 3243

                                                                        
Query: 463  caacttactgcatcatatagatgcatattatcactagcagttgcagtcaacaagtactgg 522
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3242 caacttactgcatcatatagatgcatattatcactagcagttgcagtcaacaagtactgg 3183

                                                                        
Query: 523  ccatggtcatcaaatgtcactgaagttataggtcccaattctttatcagaaactctgaag 582
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3182 ccatggtcatcaaatgtcactgaagttataggtcccaattctttatcagaaactctgaag 3123

                                                                        
Query: 583  gacttcacaggctcaaatcgtagaagattgctcttggaaatgctaacagtcatatttcct 642
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3122 gacttcacaggctcaaatcgtagaagattgctcttggaaatgctaacagtcatatttcct 3063

                                                                        
Query: 643  ttctcagctaacttttagataatcacagaactgttgctaaaccgctggtgtcccgttgag 702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3062 ttctcagctaacttttagataatcacagaactgttgctaaaccgctggtgtcccgttgag 3003

                                                                        
Query: 703  cttctctttttgtctccaaattggtaatatttcttgatggtgttaacagttttatttaaa 762
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3002 cttctctttttgtctccaaattggtaatatttcttgatggtgttaacagttttatttaaa 2943

                                                                        
Query: 763  tttaaatgttcctcgaaattgtaatgacatctgtcaaagaaatcaatagtgttagtcact 822
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2942 tttaaatgttcctcgaaattgtaatgacatctgtcaaagaaatcaatagtgttagtcact 2883

                                                                        
Query: 823  tgcaggtagagaaatagagcctttctggtcttactctggctttataaag-actgacatat 881
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2882 tgcaggtagagaaatagagcctttctggtcttactctggctttataaagaactgacatat 2823

                                                           
Query: 882  ttgagaantgtaataaggatcatgggtgtacgtaccgttcatttttt 928
            ||||||  ||||||||| |||||||||||||||||||||||||||||
Sbjct: 2822 ttgagatttgtaataagaatcatgggtgtacgtaccgttcatttttt 2776


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6558
Number of Sequences: 1807
Number of extensions: 6558
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 938
length of database: 10,358,551
effective HSP length: 16
effective length of query: 922
effective length of database: 10,329,639
effective search space: 9523927158
effective search space used: 9523927158
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)