BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZB07FM1.SCF screened BAC_end (907 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1560 1055 0.0 3x_Contig1800 498 e-140 >3x_Contig1560 Length = 9209 Score = 1055 bits (532), Expect = 0.0 Identities = 535/536 (99%) Strand = Plus / Minus Query: 372 aaatataataaatatataatcaaggcagtatctctccgaacatcacaaacacaaaccctt 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3037 aaatataataaatatataatcaaggcagtatctctccgaacatcacaaacacaaaccctt 2978 Query: 432 ctaggtcaaagttattgatgattgatggatcttgagattggactgcacagagggaatcga 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2977 ctaggtcaaagttattgatgattgatggatcttgagattggactgcacagagggaatcga 2918 Query: 492 ctatctttaaccacactggagagtgaagttcacggattgttatgatccacaatggtacta 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2917 ctatctttaaccacactggagagtgaagttcacggattgttatgatccacaatggtacta 2858 Query: 552 gcacattgaggtactcttttacaaatttctctagttcttcatttttattttgatatgatt 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2857 gcacattgaggtactcttttacaaatttctctagttcttcatttttattttgatatgatt 2798 Query: 612 tacactcaagtattccccatccttttaatatactatgttttacttcttgttgtcatcaac 671 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2797 tacactcaagtattccccatccttttaatatactatgttttacttcttgttgtcatcaac 2738 Query: 672 caaaaatgtcttttctttttttggattaactttattttcgaaactgactttttactttaa 731 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2737 caaaaatgtcttttctttttttggattaactttattttcgaaactgactttttactttaa 2678 Query: 732 gaaaattgtcagttttccgcactgaacttgcttgggcgcatacaaaaccaaatgaaaatg 791 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2677 gaaaattgtcagttttccgcactgaacttgcttgggcgcatacaaaaccaaatgaaaatg 2618 Query: 792 aactcttctgtaggcgaagaaaacgctttaatatatatacaaacacaccgaattgaattc 851 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2617 aactcttctgtaggcgaagaaaacgctttaatatatatacaaacacaccgaattgaattc 2558 Query: 852 gtttgtttcttttcttgtagatacaacgagatgtttgggggaataactaagtacct 907 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2557 gtttgtttcttttcttgtagatacaacgagatgtttggggaaataactaagtacct 2502 Score = 464 bits (234), Expect = e-130 Identities = 248/250 (99%), Gaps = 2/250 (0%) Strand = Plus / Minus Query: 88 atgtcagtttttattatgattggcattatttttgtttttcgaaaattgacaacaggtaaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3321 atgtcagtttttattatgattggcattatttttgtttttcgaaaattgacaacaggtaaa 3262 Query: 148 gacgcgaaccatattttcagaa-gccaaatcgcgaacagaattcaagaatacacgttaat 206 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 3261 gacgcgaaccatattttcagaacgccaaatcgcgaacagaattcaagaatacacgttaat 3202 Query: 207 ggaacaaagcaagtaccacaaaattgaaacctcaaaaaaaagtccattgtaacacgaaag 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3201 ggaacaaagcaagtaccacaaaattgaaacctcaaaaaaaagtccattgtaacacgaaag 3142 Query: 267 acagacatatcaagaactcgtacggtatgagcatttgctgtaatcaagtccttttatttt 326 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 3141 acagacatatcaagaactcgtacggtatgagcatttgctgtaatcaag-ccttttatttt 3083 Query: 327 tgatcaaaaa 336 |||||||||| Sbjct: 3082 tgatcaaaaa 3073 >3x_Contig1800 Length = 38778 Score = 498 bits (251), Expect = e-140 Identities = 251/251 (100%) Strand = Plus / Minus Query: 333 aaaataaatattttaaatataaataaaatataataaataaaatataataaatatataatc 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37968 aaaataaatattttaaatataaataaaatataataaataaaatataataaatatataatc 37909 Query: 393 aaggcagtatctctccgaacatcacaaacacaaacccttctaggtcaaagttattgatga 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37908 aaggcagtatctctccgaacatcacaaacacaaacccttctaggtcaaagttattgatga 37849 Query: 453 ttgatggatcttgagattggactgcacagagggaatcgactatctttaaccacactggag 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37848 ttgatggatcttgagattggactgcacagagggaatcgactatctttaaccacactggag 37789 Query: 513 agtgaagttcacggattgttatgatccacaatggtactagcacattgaggtactctttta 572 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37788 agtgaagttcacggattgttatgatccacaatggtactagcacattgaggtactctttta 37729 Query: 573 caaatttctct 583 ||||||||||| Sbjct: 37728 caaatttctct 37718 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,015 Number of Sequences: 1807 Number of extensions: 10015 Number of successful extensions: 102 Number of sequences better than 1.0e-20: 2 length of query: 907 length of database: 10,358,551 effective HSP length: 16 effective length of query: 891 effective length of database: 10,329,639 effective search space: 9203708349 effective search space used: 9203708349 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)