BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZB09FM1.SCF screened BAC_end (952 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1647 1524 0.0 >3x_Contig1647 Length = 14353 Score = 1524 bits (769), Expect = 0.0 Identities = 834/853 (97%), Gaps = 2/853 (0%) Strand = Plus / Minus Query: 88 agaggagaaagtgacacaagatgacacaagacgaggcataggcagagcgaaatatatgat 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5945 agaggagaaagtgacacaagatgacacaagacgaggcataggcagagcgaaatatatgat 5886 Query: 148 ggggagtcgggatactaaccaaaccaaacgaaaattttcgttatgttacgtgttattccg 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5885 ggggagtcgggatactaaccaaaccaaacgaaaattttcgttatgttacgtgttattccg 5826 Query: 208 ttattctttatcagtacagcgttttcatttcctattgaatgcttctgtcaagctctagct 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5825 ttattctttatcagtacagcgttttcatttcctattgaatgcttctgtcaagctctagct 5766 Query: 268 tcttttattcgatgccccaagtcccgagaaacctgcatgcgatcaatgacacgggtcata 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5765 tcttttattcgatgccccaagtcccgagaaacctgcatgcgatcaatgacacgggtcata 5706 Query: 328 gttcttccgataacaaaggtagtatacatttctgtccgtcactagtaaatattagtatag 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5705 gttcttccgataacaaaggtagtatacatttctgtccgtcactagtaaatattagtatag 5646 Query: 388 tccgacataatgatcccacattggggaattatcttgagatcggaattctaagtgattttg 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5645 tccgacataatgatcccacattggggaattatcttgagatcggaattctaagtgattttg 5586 Query: 448 cggaggactcgcgccttgaatgattggcgatttcttgggggccagaagttgggttgtagg 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5585 cggaggactcgcgccttgaatgattggcgatttcttgggggccagaagttgggttgtagg 5526 Query: 508 ctggtttagcaaaagtctttgtagtatcaaggtcaggccgtgcaagggttacttcagact 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5525 ctggtttagcaaaagtctttgtagtatcaaggtcaggccgtgcaagggttacttcagact 5466 Query: 568 ggcgtctcaacaattcagggtcatcgacaattttcaaaaacgctgtcatcagacaggctc 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5465 ggcgtctcaacaattcagggtcatcgacaattttcaaaaacgctgtcatcagacaggctc 5406 Query: 628 cgatacataatactaagggaatgtacacgaaaaataaggggtccaaattcactgttcttg 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 5405 cgatacataatactaagggaatgtacacgaaaaataaggggtccaaattcactgttctcg 5346 Query: 688 aatacaatttcaaaaataacgatggcattaccatcattgcacaacttctaattaatgcca 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5345 aatacaatttcaaaaataacgatggcattaccatcattgcacaacttctaattaatgcca 5286 Query: 748 ttgcaccaaataactcacctgtagaacttttcgatccgtatttgataactgtggattgca 807 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5285 ttgcaccaaataactcacctgtagaacttttcgatccgtatttgataactgtggattgca 5226 Query: 808 ctgttgggggatagcatgctttccagtttttgtaggagaacgtttacgtatgcagcggat 867 ||||| ||||||||||||||| ||||| ||||||||||||||| |||||||||||||||| Sbjct: 5225 ctgtt-ggggatagcatgcttcccagtatttgtaggagaacgtatacgtatgcagcggat 5167 Query: 868 tcactttgacttaatacttattcttcttgcgaaagtgggatttaaaaggaagaaacac-t 926 |||||| |||| | ||| || || || |||||||| | || ||||||||||||||| | Sbjct: 5166 tcacttcgactaatcactaatactactagcgaaagtagaataaaaaaggaagaaacacgt 5107 Query: 927 tgtacaaccatgt 939 |||||||||||| Sbjct: 5106 agtacaaccatgt 5094 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5443 Number of Sequences: 1807 Number of extensions: 5443 Number of successful extensions: 29 Number of sequences better than 1.0e-20: 1 length of query: 952 length of database: 10,358,551 effective HSP length: 16 effective length of query: 936 effective length of database: 10,329,639 effective search space: 9668542104 effective search space used: 9668542104 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)