BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC13ZB09FM1.SCF screened BAC_end
         (952 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1647                                                        1524   0.0  

>3x_Contig1647 
          Length = 14353

 Score = 1524 bits (769), Expect = 0.0
 Identities = 834/853 (97%), Gaps = 2/853 (0%)
 Strand = Plus / Minus

                                                                        
Query: 88   agaggagaaagtgacacaagatgacacaagacgaggcataggcagagcgaaatatatgat 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5945 agaggagaaagtgacacaagatgacacaagacgaggcataggcagagcgaaatatatgat 5886

                                                                        
Query: 148  ggggagtcgggatactaaccaaaccaaacgaaaattttcgttatgttacgtgttattccg 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5885 ggggagtcgggatactaaccaaaccaaacgaaaattttcgttatgttacgtgttattccg 5826

                                                                        
Query: 208  ttattctttatcagtacagcgttttcatttcctattgaatgcttctgtcaagctctagct 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5825 ttattctttatcagtacagcgttttcatttcctattgaatgcttctgtcaagctctagct 5766

                                                                        
Query: 268  tcttttattcgatgccccaagtcccgagaaacctgcatgcgatcaatgacacgggtcata 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5765 tcttttattcgatgccccaagtcccgagaaacctgcatgcgatcaatgacacgggtcata 5706

                                                                        
Query: 328  gttcttccgataacaaaggtagtatacatttctgtccgtcactagtaaatattagtatag 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5705 gttcttccgataacaaaggtagtatacatttctgtccgtcactagtaaatattagtatag 5646

                                                                        
Query: 388  tccgacataatgatcccacattggggaattatcttgagatcggaattctaagtgattttg 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5645 tccgacataatgatcccacattggggaattatcttgagatcggaattctaagtgattttg 5586

                                                                        
Query: 448  cggaggactcgcgccttgaatgattggcgatttcttgggggccagaagttgggttgtagg 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5585 cggaggactcgcgccttgaatgattggcgatttcttgggggccagaagttgggttgtagg 5526

                                                                        
Query: 508  ctggtttagcaaaagtctttgtagtatcaaggtcaggccgtgcaagggttacttcagact 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5525 ctggtttagcaaaagtctttgtagtatcaaggtcaggccgtgcaagggttacttcagact 5466

                                                                        
Query: 568  ggcgtctcaacaattcagggtcatcgacaattttcaaaaacgctgtcatcagacaggctc 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5465 ggcgtctcaacaattcagggtcatcgacaattttcaaaaacgctgtcatcagacaggctc 5406

                                                                        
Query: 628  cgatacataatactaagggaatgtacacgaaaaataaggggtccaaattcactgttcttg 687
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5405 cgatacataatactaagggaatgtacacgaaaaataaggggtccaaattcactgttctcg 5346

                                                                        
Query: 688  aatacaatttcaaaaataacgatggcattaccatcattgcacaacttctaattaatgcca 747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5345 aatacaatttcaaaaataacgatggcattaccatcattgcacaacttctaattaatgcca 5286

                                                                        
Query: 748  ttgcaccaaataactcacctgtagaacttttcgatccgtatttgataactgtggattgca 807
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5285 ttgcaccaaataactcacctgtagaacttttcgatccgtatttgataactgtggattgca 5226

                                                                        
Query: 808  ctgttgggggatagcatgctttccagtttttgtaggagaacgtttacgtatgcagcggat 867
            ||||| ||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 5225 ctgtt-ggggatagcatgcttcccagtatttgtaggagaacgtatacgtatgcagcggat 5167

                                                                        
Query: 868  tcactttgacttaatacttattcttcttgcgaaagtgggatttaaaaggaagaaacac-t 926
            |||||| |||| |  ||| || || || |||||||| | ||  ||||||||||||||| |
Sbjct: 5166 tcacttcgactaatcactaatactactagcgaaagtagaataaaaaaggaagaaacacgt 5107

                         
Query: 927  tgtacaaccatgt 939
             ||||||||||||
Sbjct: 5106 agtacaaccatgt 5094


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5443
Number of Sequences: 1807
Number of extensions: 5443
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 952
length of database: 10,358,551
effective HSP length: 16
effective length of query: 936
effective length of database: 10,329,639
effective search space: 9668542104
effective search space used: 9668542104
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)