BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC13ZB12RM1.SCF screened BAC_end
         (980 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1673                                                        1415   0.0  

>3x_Contig1673 
          Length = 13723

 Score = 1415 bits (714), Expect = 0.0
 Identities = 843/876 (96%), Gaps = 11/876 (1%)
 Strand = Plus / Minus

                                                                        
Query: 47   ctttngacaagntctaagatttttttacaaggaaggcaaactaagaggccagggattgaa 106
            |||| |||||| |||||||||||   ||||||||||||||||||||||| ||||||||||
Sbjct: 8121 cttttgacaagttctaagattttgggacaaggaaggcaaactaagaggcaagggattgaa 8062

                                                                        
Query: 107  gaagccctcaaattagaaagaaatggacgtggtgatgaaactaccagggaaattctttac 166
            ||||||||||||| ||||||||||||||||||||||||||||||||   |||||||||||
Sbjct: 8061 gaagccctcaaataagaaagaaatggacgtggtgatgaaactaccatttaaattctttac 8002

                                                                        
Query: 167  gatgaattttaggtaagggattggtatcaagatcatccagaaactaggccctgncatgaa 226
            ||||||  | ||||||||||||||||||||||||||||||||||||||||| | || |||
Sbjct: 8001 gatgaaactgaggtaagggattggtatcaagatcatccagaaactaggcccagtcaggaa 7942

                                                                        
Query: 227  tgcacagctgaaaattgcaattcggatagtgatgaaacggaccataccagttcagatcac 286
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7941 agcacagctgaaaattgcaattcggatagtgatgaaacggaccataccagttcagatcac 7882

                                                                        
Query: 287  cctatttcggcaaatactgggggatttattgataatagacccagtaaatttggtgggtca 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7881 cctatttcggcaaatactgggggatttattgataatagacccagtaaatttggtgggtca 7822

                                                                        
Query: 347  ggttttggttttggattcggtaatgcaaaggtggtgaataaaagggcctcgaagaaaagg 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7821 ggttttggttttggattcggtaatgcaaaggtggtgaataaaagggcctcgaagaaaagg 7762

                                                                        
Query: 407  tataactggaagcaaaaggtagagcaagaagaacgtagaaggcgtaaactggatgatgat 466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7761 tataactggaagcaaaaggtagagcaagaagaacgtagaaggcgtaaactggatgatgat 7702

                                                                        
Query: 467  caggattttgaatctgacgaaagtgaatcagaagaacattcatccactgcagaaagtgaa 526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7701 caggattttgaatctgacgaaagtgaatcagaagaacattcatccactgcagaaagtgaa 7642

                                                                        
Query: 527  cctgatgagagtgaatctaatagtaatgctgatagtcacagcgatgatgagtcgagtgag 586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7641 cctgatgagagtgaatctaatagtaatgctgatagtcacagcgatgatgagtcgagtgag 7582

                                                                        
Query: 587  tctgacggcgaggaaagatcggattcagaaatagcgcagtgcagaaacgtaagttcttca 646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7581 tctgacggcgaggaaagatcggattcagaaatagcgcagtgcagaaacgtaagttcttca 7522

                                                                        
Query: 647  gttgcccaagaatttaaagagtgggcaaatcaggaaattaaaaagcttgaaggtagagat 706
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7521 gttgcccaagaatttaaagagtgggcaaatcaggaaattaaaaagcttgaaggtagagat 7462

                                                                        
Query: 707  gtagaaatggttatgccttcctccaacatcaaggtcgataggaccgganagacctgaaga 766
            ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 7461 gtagaaatggttatgccttcctccaacatcaaggtcgataggacc-gagagacctgaaga 7403

                                                                        
Query: 767  ctttgaagatggactcaaagcagatgaatttaatgtgaaacgaaaattcaacacgttagg 826
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |
Sbjct: 7402 ctttgaagatggactcaaagcagatgaatttaatgtg-aacgaaaattcaacacg-taag 7345

                                                                        
Query: 827  gctttttatgtcaagggtacggagaatctgatgctgttcaaagctgtgaaaaggcggcac 886
            |||||||||||||| ||||||||| |||||||||||||| ||||||||| |||   ||||
Sbjct: 7344 gctttttatgtcaa-ggtacggag-atctgatgctgttc-aagctgtgagaag--cgcac 7290

                                                
Query: 887  tacctggtttcggcccgaggaacattagaattatgg 922
            |||||| |||||  |||||||||| |||||||||||
Sbjct: 7289 tacctgttttcg--ccgaggaaca-tagaattatgg 7257


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6782
Number of Sequences: 1807
Number of extensions: 6782
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 980
length of database: 10,358,551
effective HSP length: 16
effective length of query: 964
effective length of database: 10,329,639
effective search space: 9957771996
effective search space used: 9957771996
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)