BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZB12RM1.SCF screened BAC_end (980 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1673 1415 0.0 >3x_Contig1673 Length = 13723 Score = 1415 bits (714), Expect = 0.0 Identities = 843/876 (96%), Gaps = 11/876 (1%) Strand = Plus / Minus Query: 47 ctttngacaagntctaagatttttttacaaggaaggcaaactaagaggccagggattgaa 106 |||| |||||| ||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 8121 cttttgacaagttctaagattttgggacaaggaaggcaaactaagaggcaagggattgaa 8062 Query: 107 gaagccctcaaattagaaagaaatggacgtggtgatgaaactaccagggaaattctttac 166 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 8061 gaagccctcaaataagaaagaaatggacgtggtgatgaaactaccatttaaattctttac 8002 Query: 167 gatgaattttaggtaagggattggtatcaagatcatccagaaactaggccctgncatgaa 226 |||||| | ||||||||||||||||||||||||||||||||||||||||| | || ||| Sbjct: 8001 gatgaaactgaggtaagggattggtatcaagatcatccagaaactaggcccagtcaggaa 7942 Query: 227 tgcacagctgaaaattgcaattcggatagtgatgaaacggaccataccagttcagatcac 286 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7941 agcacagctgaaaattgcaattcggatagtgatgaaacggaccataccagttcagatcac 7882 Query: 287 cctatttcggcaaatactgggggatttattgataatagacccagtaaatttggtgggtca 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7881 cctatttcggcaaatactgggggatttattgataatagacccagtaaatttggtgggtca 7822 Query: 347 ggttttggttttggattcggtaatgcaaaggtggtgaataaaagggcctcgaagaaaagg 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7821 ggttttggttttggattcggtaatgcaaaggtggtgaataaaagggcctcgaagaaaagg 7762 Query: 407 tataactggaagcaaaaggtagagcaagaagaacgtagaaggcgtaaactggatgatgat 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7761 tataactggaagcaaaaggtagagcaagaagaacgtagaaggcgtaaactggatgatgat 7702 Query: 467 caggattttgaatctgacgaaagtgaatcagaagaacattcatccactgcagaaagtgaa 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7701 caggattttgaatctgacgaaagtgaatcagaagaacattcatccactgcagaaagtgaa 7642 Query: 527 cctgatgagagtgaatctaatagtaatgctgatagtcacagcgatgatgagtcgagtgag 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7641 cctgatgagagtgaatctaatagtaatgctgatagtcacagcgatgatgagtcgagtgag 7582 Query: 587 tctgacggcgaggaaagatcggattcagaaatagcgcagtgcagaaacgtaagttcttca 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7581 tctgacggcgaggaaagatcggattcagaaatagcgcagtgcagaaacgtaagttcttca 7522 Query: 647 gttgcccaagaatttaaagagtgggcaaatcaggaaattaaaaagcttgaaggtagagat 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7521 gttgcccaagaatttaaagagtgggcaaatcaggaaattaaaaagcttgaaggtagagat 7462 Query: 707 gtagaaatggttatgccttcctccaacatcaaggtcgataggaccgganagacctgaaga 766 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 7461 gtagaaatggttatgccttcctccaacatcaaggtcgataggacc-gagagacctgaaga 7403 Query: 767 ctttgaagatggactcaaagcagatgaatttaatgtgaaacgaaaattcaacacgttagg 826 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 7402 ctttgaagatggactcaaagcagatgaatttaatgtg-aacgaaaattcaacacg-taag 7345 Query: 827 gctttttatgtcaagggtacggagaatctgatgctgttcaaagctgtgaaaaggcggcac 886 |||||||||||||| ||||||||| |||||||||||||| ||||||||| ||| |||| Sbjct: 7344 gctttttatgtcaa-ggtacggag-atctgatgctgttc-aagctgtgagaag--cgcac 7290 Query: 887 tacctggtttcggcccgaggaacattagaattatgg 922 |||||| ||||| |||||||||| ||||||||||| Sbjct: 7289 tacctgttttcg--ccgaggaaca-tagaattatgg 7257 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6782 Number of Sequences: 1807 Number of extensions: 6782 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 980 length of database: 10,358,551 effective HSP length: 16 effective length of query: 964 effective length of database: 10,329,639 effective search space: 9957771996 effective search space used: 9957771996 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)