BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZC02RM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1681 1626 0.0 >3x_Contig1681 Length = 11798 Score = 1626 bits (820), Expect = 0.0 Identities = 872/885 (98%), Gaps = 4/885 (0%) Strand = Plus / Minus Query: 45 gcttaaacttaccaacaagacgtatagtaattctctt-acatgtaaagcttcaggcaaag 103 |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 8704 gcttaaacttaccaacaagacgtaaagtaattctcttcacatgtaaagcttcaggcaaag 8645 Query: 104 aaaacactgtatcaccacgtagaacagtgggctcagcatctaacgcagaccctgacataa 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8644 aaaacactgtatcaccacgtagaacagtgggctcagcatctaacgcagaccctgacataa 8585 Query: 164 atttaacattcccatatttggaggcaattcgaatgtcaaatataatgggagtctttttag 223 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 8584 atttaacattcccatatttggaggcaattcgaatgtcaaatataatgggagtcttcttag 8525 Query: 224 aaacaccaccaatcccactggaactgttgatgttgttatggttggtcttgtggagcccag 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8524 aaacaccaccaatcccactggaactgttgatgttgttatggttggtcttgtggagcccag 8465 Query: 284 caaacattgagaagtcagccaaaatccgaattcagttcgaagaggtaatttcacttgatc 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8464 caaacattgagaagtcagccaaaatccgaattcagttcgaagaggtaatttcacttgatc 8405 Query: 344 tatcacaatataataatcctcccctccaaatcaaaagaggagagagcactgctaatttga 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8404 tatcacaatataataatcctcccctccaaatcaaaagaggagagagcactgctaatttga 8345 Query: 404 tataaagctagaaaaaccacgtcaaagacttcttgttaggcctgtacctataaataggaa 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8344 tataaagctagaaaaaccacgtcaaagacttcttgttaggcctgtacctataaataggaa 8285 Query: 464 accgtaaaatcctttaagattaaatacagagtgaatatataccatattttgccctttaaa 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8284 accgtaaaatcctttaagattaaatacagagtgaatatataccatattttgccctttaaa 8225 Query: 524 tctcaacttactggttctttttgcaatctgtgattgcatatatattcttctttttttttt 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8224 tctcaacttactggttctttttgcaatctgtgattgcatatatattcttctttttttttt 8165 Query: 584 tatttacacttttctttcctctatttgatcgtcaaagaattgctcgagcccttgatttgc 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8164 tatttacacttttctttcctctatttgatcgtcaaagaattgctcgagcccttgatttgc 8105 Query: 644 ttctgccgtgcgacgttattgcgataaagcaaacaaccaacctatgtaatatatcggcac 703 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8104 ttctgccgtgcgacgttattgcgataaagcaaacaaccaacctatgtaatatatcggcac 8045 Query: 704 aaataaggctgagatagaagtgtgtctatccgaatggaactaagaggtaagaaattctga 763 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8044 aaataaggctgagatagaagtgtgtctatccgaatggaactaagaggtaagaaattctga 7985 Query: 764 tgttntagactaaccaccggaggaaattatttcttctatgtgatcggaaacagatatcgc 823 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7984 tgttttagactaaccaccggaggaaattatttcttctatgtgatcggaaacagatatcgc 7925 Query: 824 ctcgagtgcttattttttcgnactgcagttaataagggtttgccgnngatagttgctatt 883 |||||||||||| ||||||| |||||||||||| |||| |||||| ||||||||||||| Sbjct: 7924 ctcgagtgctta-tttttcggactgcagttaat-aggggttgccg-tgatagttgctatt 7868 Query: 884 acatctgttataggcatggtgtctgtactttcacgcatgctgtaa 928 ||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 7867 acatctgttataggcattgtgtctgtacttcaacgcatgctgtaa 7823 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,376 Number of Sequences: 1807 Number of extensions: 12376 Number of successful extensions: 144 Number of sequences better than 1.0e-20: 1 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)