BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZC03FM1.SCF screened BAC_end (962 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1159 1465 0.0 >3x_Contig1159 Length = 4873 Score = 1465 bits (739), Expect = 0.0 Identities = 801/815 (98%), Gaps = 5/815 (0%) Strand = Plus / Minus Query: 90 tatctttgatgaactctacttcacctcgtgtgaaatgtcaagctactttggccttgagaa 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 tatctttgatgaactctacttcacctcgtgtgaaatgtcaagctactttggccttgagaa 1411 Query: 150 acttagcttcagataccaactaccaattggagattgttagagctggtggattaccagact 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1410 acttagcttcagataccaactaccaattggagattgttagagctggtggattaccagact 1351 Query: 210 tggttcaatttatt-agtcggattctttaccattagtcttggccagcgtcgcatgtatca 268 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1350 tggttcaattgattcagtcggattctttaccattagtcttggccagcgtcgcatgtatca 1291 Query: 269 gaaatatttccatccatccattaaacgaaggtctaattgtagatgccggatttctaccac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1290 gaaatatttccatccatccattaaacgaaggtctaattgtagatgccggatttctaccac 1231 Query: 329 ctttagtaaaattgcttgattaccaagaatcagaagaaattcaatgtcatgctgtttcaa 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1230 ctttagtaaaattgcttgattaccaagaatcagaagaaattcaatgtcatgctgtttcaa 1171 Query: 389 ctttaagaaacttggctgcttcatctgaaaaaaatagagcagagttcttccaatctggtg 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1170 ctttaagaaacttggctgcttcatctgaaaaaaatagagcagagttcttccaatctggtg 1111 Query: 449 taattgaaaaattcaagcaacttgccttgacatgtcccatcagcgttcaaagtgaaatta 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1110 taattgaaaaattcaagcaacttgccttgacatgtcccatcagcgttcaaagtgaaatta 1051 Query: 509 gtgcttgctttgctatcttggcactttcagataatactaaatatgatcttttgcaacaag 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1050 gtgcttgctttgctatcttggcactttcagataatactaaatatgatcttttgcaacaag 991 Query: 569 acgtactaaaagttttgatcccaatgacaatgtcccaggaccaagagatctctggtaact 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 acgtactaaaagttttgatcccaatgacaatgtcccaggaccaagagatctctggtaact 931 Query: 629 ctgctgctgctgtagcaaacttgatctctagggtcagcaatttagagaaaatattggagt 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 ctgctgctgctgtagcaaacttgatctctagggtcagcaatttagagaaaatattggagt 871 Query: 689 actggggtcaaccaaacgatggtatcaagggtttcttgatcagattcttgtctagtgact 748 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 870 actggggtcaaccaaacgatggtatcaagggtttcttgatcagattcttgtctagtgact 811 Query: 749 tccctacctatgaacatattgctctatggaccatttttacaactattttgaatgtcacaa 808 ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 810 tccctacctatgaacatattgctctatggacca-ttttacaacta-tttgaatgtcacaa 753 Query: 809 cggaaaccattttacagtttaattaaagaagatcatatactcttcaacggggtcaagaaa 868 | ||||||| |||||| ||||||||||||||||| | |||| ||||||||||||||||| Sbjct: 752 c-gaaacca-tttacaagttaattaaagaagatcaaaaactcgtcaacggggtcaagaaa 695 Query: 869 atcgctgatgaatactacgctggggttagggaata 903 |||||||||||| ||||||||| || ||||||||| Sbjct: 694 atcgctgatgaaaactacgctgtggctagggaata 660 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7664 Number of Sequences: 1807 Number of extensions: 7664 Number of successful extensions: 65 Number of sequences better than 1.0e-20: 1 length of query: 962 length of database: 10,358,551 effective HSP length: 16 effective length of query: 946 effective length of database: 10,329,639 effective search space: 9771838494 effective search space used: 9771838494 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)