BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC13ZC06RM1.SCF screened BAC_end
         (960 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1567                                                        1711   0.0  

>3x_Contig1567 
          Length = 11673

 Score = 1711 bits (863), Expect = 0.0
 Identities = 905/917 (98%), Gaps = 2/917 (0%)
 Strand = Plus / Plus

                                                                        
Query: 45   gcttgctgagatatcagccaaagtttttgatcaaaatttcaatccaacaaatgccagaac 104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7725 gcttgctgagatatcagccaaagtttttgatcaaaatttcaatccaacaaatgccagaac 7784

                                                                        
Query: 105  tgggtctaagatcctagcacagaggcttaaaggacctgctattgcgaattattatggtaa 164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7785 tgggtctaagatcctagcacagaggcttaaaggacctgctattgcgaattattatggtaa 7844

                                                                        
Query: 165  cccagattttatcagattcaagcaattgaagaaactatatccaggcatgaacttttttgt 224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| 
Sbjct: 7845 cccagattttatcagattcaagcaattgaagaaactatatccaggcatgaacttcgttg- 7903

                                                                        
Query: 225  atgaagaagaacaatatagattgactatgcttgaactaagaaagcgtagaggtaagggtg 284
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7904 atgaagaagaacaatatagattgactatgcttgaactaagaaagcgtagaggtaagggtg 7963

                                                                        
Query: 285  ctccaactaagaagagagaggcctctggtgacggtaaaaagaccaagaagagaaagtgat 344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7964 ctccaactaagaagagagaggcctctggtgacggtaaaaagaccaagaagagaaagtgat 8023

                                                                        
Query: 345  caaaatgagcccagcctatccttttatcccacttaaagggacttgcaattaacatttcca 404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8024 caaaatgagcccagcctatccttttatcccacttaaagggacttgcaattaacatttcca 8083

                                                                        
Query: 405  tcatataaaaataccttgtatataaattatatcagtcagttcaaatagacccaagaattt 464
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8084 tcatataaaaataccttgtatataaattatatcagtcagttcaaatagacccaagaattt 8143

                                                                        
Query: 465  aacgaatttcaactatgtttttattaaatacgaatattcaagtaagattcaaactatgca 524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8144 aacgaatttcaactatgtttttattaaatacgaatattcaagtaagattcaaactatgca 8203

                                                                        
Query: 525  atctgtgccattaattgtggttgtgagaggggtttatatcgtatcttgttccattaccat 584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8204 atctgtgccattaattgtggttgtgagaggggtttatatcgtatcttgttccattaccat 8263

                                                                        
Query: 585  ctttaactttttccatagtaaatcgatatcaattggatgtctcggtagattatggtacaa 644
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8264 ctttaactttttccatagtaaatcgatatcaattggatgtctcggtagattatggtacaa 8323

                                                                        
Query: 645  aacacgatagagttcatctcttcgtacattaagaactgatccctgactcaccatcttcaa 704
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8324 aacacgatagagttcatctcttcgtacattaagaactgatccctgactcaccatcttcaa 8383

                                                                        
Query: 705  agtctcaaccgagaacatctgtctttgaatggatttcatgacgtttgtgaatggttcana 764
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8384 agtctcaaccgagaacatctgtctttgaatggatttcatgacgtttgtgaatggttcaaa 8443

                                                                        
Query: 765  ggtcatgaaaaagctgattggattattcgatattaataagtgatcatcatatactttgaa 824
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8444 ggtcatgaaaaagctgattggattattcgatattaataagtgatcatcatatactttgaa 8503

                                                                        
Query: 825  cttgataccaccagntaaccttttagcatcttttattcgttaaagcaatgcaaataaagg 884
            |||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 8504 cttgataccaccaggtaaccttttagcatcttttatccgtaaaagcaatgcaaataaagg 8563

                                                                        
Query: 885  gaaatggttgattaaggccaaacttagttcaagcaacacttttactgtaaagtcaacaaa 944
            |||||||||||| | ||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 8564 gaaatggttgataagggccaaacttagttcaagcaacactttcactgtaaggtcaacaaa 8623

                             
Query: 945  tctg-acactgtgtata 960
            |||| ||||||||||||
Sbjct: 8624 tctgaacactgtgtata 8640


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8247
Number of Sequences: 1807
Number of extensions: 8247
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 960
length of database: 10,358,551
effective HSP length: 16
effective length of query: 944
effective length of database: 10,329,639
effective search space: 9751179216
effective search space used: 9751179216
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)