BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZC06RM1.SCF screened BAC_end (960 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1567 1711 0.0 >3x_Contig1567 Length = 11673 Score = 1711 bits (863), Expect = 0.0 Identities = 905/917 (98%), Gaps = 2/917 (0%) Strand = Plus / Plus Query: 45 gcttgctgagatatcagccaaagtttttgatcaaaatttcaatccaacaaatgccagaac 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7725 gcttgctgagatatcagccaaagtttttgatcaaaatttcaatccaacaaatgccagaac 7784 Query: 105 tgggtctaagatcctagcacagaggcttaaaggacctgctattgcgaattattatggtaa 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7785 tgggtctaagatcctagcacagaggcttaaaggacctgctattgcgaattattatggtaa 7844 Query: 165 cccagattttatcagattcaagcaattgaagaaactatatccaggcatgaacttttttgt 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 7845 cccagattttatcagattcaagcaattgaagaaactatatccaggcatgaacttcgttg- 7903 Query: 225 atgaagaagaacaatatagattgactatgcttgaactaagaaagcgtagaggtaagggtg 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7904 atgaagaagaacaatatagattgactatgcttgaactaagaaagcgtagaggtaagggtg 7963 Query: 285 ctccaactaagaagagagaggcctctggtgacggtaaaaagaccaagaagagaaagtgat 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7964 ctccaactaagaagagagaggcctctggtgacggtaaaaagaccaagaagagaaagtgat 8023 Query: 345 caaaatgagcccagcctatccttttatcccacttaaagggacttgcaattaacatttcca 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8024 caaaatgagcccagcctatccttttatcccacttaaagggacttgcaattaacatttcca 8083 Query: 405 tcatataaaaataccttgtatataaattatatcagtcagttcaaatagacccaagaattt 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8084 tcatataaaaataccttgtatataaattatatcagtcagttcaaatagacccaagaattt 8143 Query: 465 aacgaatttcaactatgtttttattaaatacgaatattcaagtaagattcaaactatgca 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8144 aacgaatttcaactatgtttttattaaatacgaatattcaagtaagattcaaactatgca 8203 Query: 525 atctgtgccattaattgtggttgtgagaggggtttatatcgtatcttgttccattaccat 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8204 atctgtgccattaattgtggttgtgagaggggtttatatcgtatcttgttccattaccat 8263 Query: 585 ctttaactttttccatagtaaatcgatatcaattggatgtctcggtagattatggtacaa 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8264 ctttaactttttccatagtaaatcgatatcaattggatgtctcggtagattatggtacaa 8323 Query: 645 aacacgatagagttcatctcttcgtacattaagaactgatccctgactcaccatcttcaa 704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8324 aacacgatagagttcatctcttcgtacattaagaactgatccctgactcaccatcttcaa 8383 Query: 705 agtctcaaccgagaacatctgtctttgaatggatttcatgacgtttgtgaatggttcana 764 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 8384 agtctcaaccgagaacatctgtctttgaatggatttcatgacgtttgtgaatggttcaaa 8443 Query: 765 ggtcatgaaaaagctgattggattattcgatattaataagtgatcatcatatactttgaa 824 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8444 ggtcatgaaaaagctgattggattattcgatattaataagtgatcatcatatactttgaa 8503 Query: 825 cttgataccaccagntaaccttttagcatcttttattcgttaaagcaatgcaaataaagg 884 |||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 8504 cttgataccaccaggtaaccttttagcatcttttatccgtaaaagcaatgcaaataaagg 8563 Query: 885 gaaatggttgattaaggccaaacttagttcaagcaacacttttactgtaaagtcaacaaa 944 |||||||||||| | ||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 8564 gaaatggttgataagggccaaacttagttcaagcaacactttcactgtaaggtcaacaaa 8623 Query: 945 tctg-acactgtgtata 960 |||| |||||||||||| Sbjct: 8624 tctgaacactgtgtata 8640 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8247 Number of Sequences: 1807 Number of extensions: 8247 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 960 length of database: 10,358,551 effective HSP length: 16 effective length of query: 944 effective length of database: 10,329,639 effective search space: 9751179216 effective search space used: 9751179216 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)