BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZC08FM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig485 1540 0.0 >3x_Contig485 Length = 1328 Score = 1540 bits (777), Expect = 0.0 Identities = 825/836 (98%), Gaps = 4/836 (0%) Strand = Plus / Plus Query: 100 ggtcttctttt-aacagcatggactgggttaagatacaaactatgcaactactaaaacat 158 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9 ggtcttcttttcaacagcatggactgggttaagatacaaactatgcaactactaaaacat 68 Query: 159 atctttccattgacggaattatccagaccggagtttataggcgtcggggccgacttcatt 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69 atctttccattgacggaattatccagaccggagtttataggcgtcggggccgacttcatt 128 Query: 219 tcaccattgctaaggctattacttggtgaattggaatccgacgcgttagaggtactcaat 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 tcaccattgctaaggctattacttggtgaattggaatccgacgcgttagaggtactcaat 188 Query: 279 accatccctaaggtatcggggagcaagatggataaagatgttctcagaataagtatggga 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 accatccctaaggtatcggggagcaagatggataaagatgttctcagaataagtatggga 248 Query: 339 aataaggacgcgaagaaggtatataacaagacagcgaccttatttggaatccccgaagag 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 aataaggacgcgaagaaggtatataacaagacagcgaccttatttggaatccccgaagag 308 Query: 399 agcggctggtctattcccatgcctgcgttgacggcggcatcgactcggcataatgtgcac 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 agcggctggtctattcccatgcctgcgttgacggcggcatcgactcggcataatgtgcac 368 Query: 459 gctgtatttacaacttgcgcggtaatggtcggtggggaagttgataatggcgattcaggt 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 gctgtatttacaacttgcgcggtaatggtcggtggggaagttgataatggcgattcaggt 428 Query: 519 attctagaagagattgtcgaattccatgctgatggtggttatgtacaaggaacagatgaa 578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 attctagaagagattgtcgaattccatgctgatggtggttatgtacaaggaacagatgaa 488 Query: 579 ttcggtgacgtggtatctgtcacagaagacaaagacccttcgttaagccatatgtgggcc 638 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 ttcggtgacgtggtatctgtcacagaagacaaagacccttcgttaagccatatgtgggcc 548 Query: 639 gaattagacgatcttggctctttcttcaataaatcggattttatggaggaagaacaggaa 698 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 549 gaattagacgatcttggctctttcttcaataaatcggattttatggaggaagaacaggaa 608 Query: 699 gaagatgatgtctgattaagttttcataatcaagacttggaaacatctaacaggtgtata 758 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 609 gaagatgatgtctgattaagttttcataatcaagacttggaaacatctaacaggtgtata 668 Query: 759 actaattaaataagacttatattatttaagtttggagatagtaatcgcactaaagctatc 818 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 669 actaattaaataagacttatattatttaagtttggagatagtaatcgcactaaagctatc 728 Query: 819 gattagaaaagcagccaagtgagactatattagtgtctgttttggtatcatctaatggtt 878 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 729 gattagaaagcaagccaagtgagactata-tagtgtctgttttggtatcatctaatggtt 787 Query: 879 cctnctttgtctttgaatcatt-gcagttacaccaca-atattccgtggtaagtat 932 ||| |||||||||||||||||| |||||||||||| | |||| | ||||||||||| Sbjct: 788 cctcctttgtctttgaatcattggcagttacaccagacatatacggtggtaagtat 843 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5617 Number of Sequences: 1807 Number of extensions: 5617 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)