BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZC08RM1.SCF screened BAC_end (962 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1741 1195 0.0 >3x_Contig1741 Length = 21706 Score = 1195 bits (603), Expect = 0.0 Identities = 658/675 (97%), Gaps = 1/675 (0%) Strand = Plus / Plus Query: 69 agtggagactggtgtatgagcgcgagtgttgttacgacgtggggatgctattttccgttg 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6544 agtggagactggtgtatgagcgcgagtgttgttacgacgtggggatgctattttccgttg 6603 Query: 129 tttcaccactcgtcttggacttagtagggttgcctctgtggcagggctaccacctgttat 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6604 tttcaccactcgtcttggacttagtagggttgcctctgtggcagggctaccacctgttat 6663 Query: 189 tggagcgctgctgaccaatttagatgtttcggaagataaatcttat-gtgattgcgtttg 247 ||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||| Sbjct: 6664 tggagcgctgctgaccaatttagatgtttcggaagataaatctaattgggattgcgtttg 6723 Query: 248 cttttgtaatttttcactttcaagaagtttattcttaaaatattcagcttctttcttcac 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6724 cttttgtaatttttcactttcaagaagtttattcttaaaatattcagcttctttcttcac 6783 Query: 308 tagattcttttcaactgcaaaacgttcatccttttcctttctgttttcccagtgggatag 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6784 tagattcttttcaactgcaaaacgttcatccttttcctttctgttttcccagtgggatag 6843 Query: 368 ttgtgcttgtaatgaccagtgcgatatcgccgacagagatcggttcaataacgctattat 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6844 ttgtgcttgtaatgaccagtgcgatatcgccgacagagatcggttcaataacgctattat 6903 Query: 428 tctcacagtgtcctctgtgcgaggctcgatggtttccagatccgaaacagctttggctat 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6904 tctcacagtgtcctctgtgcgaggctcgatggtttccagatccgaaacagctttggctat 6963 Query: 488 atccaattctaatagtctagtatttctcaacgaatgctcggtgtcctgcagcacgtcata 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6964 atccaattctaatagtctagtatttctcaacgaatgctcggtgtcctgcagcacgtcata 7023 Query: 548 ttcggtctgcaattcatctgacaatagcgccatcgactgtgatctagacctaacattatt 607 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7024 ttcggtctgcaattcatctgacaatagcgccatcgactgtgatctagacctaacattatt 7083 Query: 608 atttcccgcagcagaagctgcatccagttcgtattctaacttcccagtttcttctgtagt 667 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 7084 atttcccgcagcagaagctgcatccagttcgtattctaacttcccaggttcttctggagt 7143 Query: 668 tattgtctggtttcttcctttttttcgcacacctgatctggcactattaccagtttactc 727 ||||||||| |||||||| || | ||||| ||| ||||||||||||| ||| |||| Sbjct: 7144 tattgtctgcattcttcctcttgtatccacacttgaactggcactattacaagtagactc 7203 Query: 728 acttttatcactcct 742 ||||||||||||||| Sbjct: 7204 acttttatcactcct 7218 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8957 Number of Sequences: 1807 Number of extensions: 8957 Number of successful extensions: 95 Number of sequences better than 1.0e-20: 1 length of query: 962 length of database: 10,358,551 effective HSP length: 16 effective length of query: 946 effective length of database: 10,329,639 effective search space: 9771838494 effective search space used: 9771838494 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)