BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZC12FM1.SCF screened BAC_end (950 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig911 129 1e-29 >3x_Contig911 Length = 4722 Score = 129 bits (65), Expect = 1e-29 Identities = 108/117 (92%), Gaps = 4/117 (3%) Strand = Plus / Plus Query: 837 attaacaggctcattacatcaacacttcgcactctttcttt-ttgttgatcccagtatca 895 |||||||||||||| ||||||||||| | |||||||||||| | |||||||||||||||| Sbjct: 1 attaacaggctcatcacatcaacactccccactctttctttatcgttgatcccagtatca 60 Query: 896 gcaagaata-cactaat-tcttcaaaac-acataaaaactgatcacattcatgctgt 949 ||||||||| | ||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 61 gcaagaatacccctaatatcttcaaaacaacataaaaactgatcacattcatgctgt 117 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7788 Number of Sequences: 1807 Number of extensions: 7788 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 950 length of database: 10,358,551 effective HSP length: 16 effective length of query: 934 effective length of database: 10,329,639 effective search space: 9647882826 effective search space used: 9647882826 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)