BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZC12RM1.SCF screened BAC_end (952 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1540 1663 0.0 >3x_Contig1540 Length = 9505 Score = 1663 bits (839), Expect = 0.0 Identities = 892/909 (98%), Gaps = 1/909 (0%) Strand = Plus / Minus Query: 45 cttgcataggtcgacagctgcttttgtgtgaccacgtctggccagaacaccgccttcttt 104 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 5308 cttgcataggtcgacagctgcttcagtgtgaccacgtctggccagaacaccgccttcttt 5249 Query: 105 ggctcttaatggcaccacatgaccaggcttcaagtaatcaatagcggtagtagtcttgtc 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5248 ggctcttaatggcaccacatgaccaggcttcaagtaatcaatagcggtagtagtcttgtc 5189 Query: 165 agcatgtttggaacacgttaatgcacgatcatgtgctgaaatccctgttgnggttccgng 224 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 5188 agcaagtttggaacacgttaatgcacgatcatgtgctgaaatccctgttgtggttccgtg 5129 Query: 225 tgcataatcacaagtaatggtatatgcggttccatgtctgtcatctgcgtaactttcaca 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5128 tgcataatcacaagtaatggtatatgcggttccatgtctgtcatctgcgtaactttcaca 5069 Query: 285 cgaaagatctttcaaaagaggtagatctaaacgatctgcccattcgttggtcattggtgc 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5068 cgaaagatctttcaaaagaggtagatctaaacgatctgcccattcgttggtcattggtgc 5009 Query: 345 acaaacatacccagaagaataacgtatcaagaaggccatttgttcggtggtgatcgcatt 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5008 acaaacatacccagaagaataacgtatcaagaaggccatttgttcggtggtgatcgcatt 4949 Query: 405 agccgcacagattaggtcaccttcgttctcacgtgactcgtcatccatcacaataacgaa 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4948 agccgcacagattaggtcaccttcgttctcacgtgactcgtcatccatcacaataacgaa 4889 Query: 465 cttattctgtctgaacttttctatggctacttcgatatcggtgaatatcatttttattgt 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4888 cttattctgtctgaacttttctatggctacttcgatatcggtgaatatcatttttattgt 4829 Query: 525 attataacttgctattggattaacctgattttaattgaagtgtaagataacaacgtttgg 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4828 attataacttgctattggattaacctgattttaattgaagtgtaagataacaacgtttgg 4769 Query: 585 cttaactagtcttaaccgttcactttactgtgactatggaataaatagatatctcaaaat 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4768 cttaactagtcttaaccgttcactttactgtgactatggaataaatagatatctcaaaat 4709 Query: 645 agcctccgtacttccactggtatctttgaaagtgtccgatctcactgcttttatacactt 704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4708 agcctccgtacttccactggtatctttgaaagtgtccgatctcactgcttttatacactt 4649 Query: 705 aaacaatgaaatacagtcataaacaagagtcataagtaaaccatttcaattctttaccag 764 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4648 aaacaatgaaatacagtcataaacaagagtcataagtaaaccatttcaattctttaccag 4589 Query: 765 tcttactttcaaagtgtgtctaattttgcactcttttgaaatatcaacagattggtttca 824 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 4588 tcttactttcaaagtgtgtctaattttgcactctttcgaaatatcaacagattggtttca 4529 Query: 825 tgctttaaacccataatgactaaatcttccggtcctccattgtaatgccgtagaaaattt 884 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4528 tgctttaaacccataatgactaagtcttccggtcctccattgtaatgccgtagaaaattt 4469 Query: 885 tttttttccaacaaaaattactaattatcacatgacctacctttgcaagccattta-tta 943 ||| || ||| |||| |||||||| ||||||||||||||||| || ||||||||| | | Sbjct: 4468 tttcttcccacaaaaatttactaataatcacatgacctaccttcgcgagccatttagtaa 4409 Query: 944 ttgtaacag 952 ||||||||| Sbjct: 4408 ttgtaacag 4400 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8021 Number of Sequences: 1807 Number of extensions: 8021 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 952 length of database: 10,358,551 effective HSP length: 16 effective length of query: 936 effective length of database: 10,329,639 effective search space: 9668542104 effective search space used: 9668542104 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)