BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZD05FM1.SCF screened BAC_end (944 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1726 1594 0.0 >3x_Contig1726 Length = 20144 Score = 1594 bits (804), Expect = 0.0 Identities = 850/860 (98%), Gaps = 4/860 (0%) Strand = Plus / Plus Query: 87 ttgcaatcgatattaccgaggataaactctcaactcgaaaaatctggtttacctgacatc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3532 ttgcaatcgatattaccgaggataaactctcaactcgaaaaatctggtttacctgacatc 3591 Query: 147 ttaggatccagcttccaatcaaatcgagttcccactctaacaaacgttatacgatccatt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3592 ttaggatccagcttccaatcaaatcgagttcccactctaacaaacgttatacgatccatt 3651 Query: 207 ccaagggaatctattacgacagaaaggcttaccggagagctagcacatattgaagaaaag 266 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3652 ccaagggaatctatcacgacagaaaggcttaccggagagctagcacatattgaagaaaag 3711 Query: 267 cagggaagttctatgagcaccaattccgacatgagtcgcatacaaggtgaaatctttgaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3712 cagggaagttctatgagcaccaattccgacatgagtcgcatacaaggtgaaatctttgaa 3771 Query: 327 gagttaggtgagaacttgcattcttattatatccctaacgacgttagattggtacaaatc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3772 gagttaggtgagaacttgcattcttattatatccctaacgacgttagattggtacaaatc 3831 Query: 387 atgaaactttgggtttggtgtgaaaaccaattgcatagttcggatgttggtgttccgagg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3832 atgaaactttgggtttggtgtgaaaaccaattgcatagttcggatgttggtgttccgagg 3891 Query: 447 gttgaaggagtgatttagtgcaaaatctataatcttttatactatatatgcatgggttcc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3892 gttgaaggagtgatttagtgcaaaatctataatcttttatactatatatgcatgggttcc 3951 Query: 507 ctatattcacattatgttttcaagcatttaacggcagcttgcaattttcacaccaaaaac 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3952 ctatattcacattatgttttcaagcatttaacggcagcttgcaattttcacaccaaaaac 4011 Query: 567 tcacagtctatagtgtcaccagtttccatctttaagaaacacaattgaatatcgtcgagg 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4012 tcacagtctatagtgtcaccagtttccatctttaagaaacacaattgaatatcgtcgagg 4071 Query: 627 ttttttggaagttcctcgctcatggtgttgtagatttttacatttttggtaatggtgaag 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4072 ttttttggaagttcctcgctcatggtgttgtagatttttacatttttggtaatggtgaag 4131 Query: 687 gttttgcttggctgtttgaactgatcataaaagtgaccatctttaaagaagtgataaagt 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4132 gttttgcttggctgtttgaactgatcataaaagtgaccatctttaaagaagtgataaagt 4191 Query: 747 tttgattttaatagccttaatgtacaaccaaactctggtcttttttcattttcgaattct 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4192 tttgattttaatagccttaatgtacaaccaaactctggtcttttttcattttcgaattct 4251 Query: 807 t-ttgtgagaattcaatgtggaatgtgattggattatcc-acagaagcttttt-gtatct 863 | | ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 4252 tctggtgagaattcaatgtggaatgtgattggattatccaacagaagctttttggtatct 4311 Query: 864 tcgtcgataacttggcatcttacgtatatgtgagcgacatgcacaggttttggcaaaaaa 923 |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || Sbjct: 4312 tcgtcgataacttggcatctaacgtatatgtgagcgacatgcacagg-tttggcaaagaa 4370 Query: 924 actttccctcgattcgaact 943 |||||||||||||||||| Sbjct: 4371 cttttccctcgattcgaact 4390 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7114 Number of Sequences: 1807 Number of extensions: 7114 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 944 length of database: 10,358,551 effective HSP length: 16 effective length of query: 928 effective length of database: 10,329,639 effective search space: 9585904992 effective search space used: 9585904992 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)