BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZD07FM1.SCF screened BAC_end (908 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1051 1562 0.0 >3x_Contig1051 Length = 4315 Score = 1562 bits (788), Expect = 0.0 Identities = 817/823 (99%), Gaps = 3/823 (0%) Strand = Plus / Minus Query: 87 aaattaaccggacaagatggaaatggcttcttggacatggtaaaagagaaactttcgttt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3303 aaattaaccggacaagatggaaatggcttcttggacatggtaaaagagaaactttcgttt 3244 Query: 147 ctcaatacaaaagtgtacttgagacaaggagaagtggaaatacttgatcatcccgttcag 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3243 ctcaatacaaaagtgtacttgagacaaggagaagtggaaatacttgatcatcccgttcag 3184 Query: 207 ttttattcaactttaaagaataaaatctctgctgctcaaaacagagtgtttatggcatct 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3183 ttttattcaactttaaagaataaaatctctgctgctcaaaacagagtgtttatggcatct 3124 Query: 267 ttgtacttgggtaaaactgaaaatgatcttatcaactgtatttcagattcgctaaagaag 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3123 ttgtacttgggtaaaactgaaaatgatcttatcaactgtatttcagattcgctaaagaag 3064 Query: 327 aataaagatttgaaggtatactttatggtagatggattaagaggtaccagagagactccg 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3063 aataaagatttgaaggtatactttatggtagatggattaagaggtaccagagagactccg 3004 Query: 387 aacaaatgctcagcttccttgttggctgaattagagaaagaattcggagagagagtagaa 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3003 aacaaatgctcagcttccttgttggctgaattagagaaagaattcggagagagagtagaa 2944 Query: 447 attaggctgtatagaacaccagaattcgttggctggaagactttgatcccaaagcgtttc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2943 attaggctgtatagaacaccagaattcgttggctggaagactttgatcccaaagcgtttc 2884 Query: 507 aacgagggcttgggtttgcaacatatgaaaatatacggtgtggacgaagaagtgatatta 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2883 aacgagggcttgggtttgcaacatatgaaaatatacggtgtggacgaagaagtgatatta 2824 Query: 567 agtggggcaaacctatccaatgattatttcactaatagacaagataggtattatgttttc 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 agtggggcaaacctatccaatgattatttcactaatagacaagataggtattatgttttc 2764 Query: 627 aaaaataaattcctttcggactattatttcaaggttcatcaattagtgagtaaaatcagt 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2763 aaaaataaattcctttcggactattatttcaaggttcatcaattagtgagtaaaatcagt 2704 Query: 687 tacaggggttcgtcatgctaataacgaacagaaatatcaccttgaatggccagaatcaaa 746 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2703 taca-gggttcgtcatgctaataacgaacagaaatatcaccttgaatggccagaatcaaa 2645 Query: 747 tgtagcggttgaacctttgaaagat-aacatanatttattgaaaaatgttcgtctatttt 805 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 2644 tgtagcggttgaacctttgaaagataaacataaatttattgaaaaatgttcgtctatttt 2585 Query: 806 cactgattttttaagaagaccatcatctatgggtaacgcacatctgatcaaagatttttc 865 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2584 cactgattttttaagaggaccatcatctatgggtaacgcacatctgatcaaagatttttc 2525 Query: 866 tc-atatcctaccattgtctatccagtttcacaaattactcca 907 || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 2524 tcaatatcctaccattgtctatccagtttcacaatttactcca 2482 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7348 Number of Sequences: 1807 Number of extensions: 7348 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 908 length of database: 10,358,551 effective HSP length: 16 effective length of query: 892 effective length of database: 10,329,639 effective search space: 9214037988 effective search space used: 9214037988 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)