BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC13ZD07FM1.SCF screened BAC_end
         (908 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1051                                                        1562   0.0  

>3x_Contig1051 
          Length = 4315

 Score = 1562 bits (788), Expect = 0.0
 Identities = 817/823 (99%), Gaps = 3/823 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   aaattaaccggacaagatggaaatggcttcttggacatggtaaaagagaaactttcgttt 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3303 aaattaaccggacaagatggaaatggcttcttggacatggtaaaagagaaactttcgttt 3244

                                                                        
Query: 147  ctcaatacaaaagtgtacttgagacaaggagaagtggaaatacttgatcatcccgttcag 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3243 ctcaatacaaaagtgtacttgagacaaggagaagtggaaatacttgatcatcccgttcag 3184

                                                                        
Query: 207  ttttattcaactttaaagaataaaatctctgctgctcaaaacagagtgtttatggcatct 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3183 ttttattcaactttaaagaataaaatctctgctgctcaaaacagagtgtttatggcatct 3124

                                                                        
Query: 267  ttgtacttgggtaaaactgaaaatgatcttatcaactgtatttcagattcgctaaagaag 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3123 ttgtacttgggtaaaactgaaaatgatcttatcaactgtatttcagattcgctaaagaag 3064

                                                                        
Query: 327  aataaagatttgaaggtatactttatggtagatggattaagaggtaccagagagactccg 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3063 aataaagatttgaaggtatactttatggtagatggattaagaggtaccagagagactccg 3004

                                                                        
Query: 387  aacaaatgctcagcttccttgttggctgaattagagaaagaattcggagagagagtagaa 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3003 aacaaatgctcagcttccttgttggctgaattagagaaagaattcggagagagagtagaa 2944

                                                                        
Query: 447  attaggctgtatagaacaccagaattcgttggctggaagactttgatcccaaagcgtttc 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2943 attaggctgtatagaacaccagaattcgttggctggaagactttgatcccaaagcgtttc 2884

                                                                        
Query: 507  aacgagggcttgggtttgcaacatatgaaaatatacggtgtggacgaagaagtgatatta 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2883 aacgagggcttgggtttgcaacatatgaaaatatacggtgtggacgaagaagtgatatta 2824

                                                                        
Query: 567  agtggggcaaacctatccaatgattatttcactaatagacaagataggtattatgttttc 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2823 agtggggcaaacctatccaatgattatttcactaatagacaagataggtattatgttttc 2764

                                                                        
Query: 627  aaaaataaattcctttcggactattatttcaaggttcatcaattagtgagtaaaatcagt 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2763 aaaaataaattcctttcggactattatttcaaggttcatcaattagtgagtaaaatcagt 2704

                                                                        
Query: 687  tacaggggttcgtcatgctaataacgaacagaaatatcaccttgaatggccagaatcaaa 746
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2703 taca-gggttcgtcatgctaataacgaacagaaatatcaccttgaatggccagaatcaaa 2645

                                                                        
Query: 747  tgtagcggttgaacctttgaaagat-aacatanatttattgaaaaatgttcgtctatttt 805
            ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 2644 tgtagcggttgaacctttgaaagataaacataaatttattgaaaaatgttcgtctatttt 2585

                                                                        
Query: 806  cactgattttttaagaagaccatcatctatgggtaacgcacatctgatcaaagatttttc 865
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2584 cactgattttttaagaggaccatcatctatgggtaacgcacatctgatcaaagatttttc 2525

                                                       
Query: 866  tc-atatcctaccattgtctatccagtttcacaaattactcca 907
            || ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2524 tcaatatcctaccattgtctatccagtttcacaatttactcca 2482


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7348
Number of Sequences: 1807
Number of extensions: 7348
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 908
length of database: 10,358,551
effective HSP length: 16
effective length of query: 892
effective length of database: 10,329,639
effective search space: 9214037988
effective search space used: 9214037988
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)