BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZD08RM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1463 1622 0.0 >3x_Contig1463 Length = 9363 Score = 1622 bits (818), Expect = 0.0 Identities = 882/901 (97%), Gaps = 3/901 (0%) Strand = Plus / Plus Query: 48 gcttgtcaccaagtggaggtagtgctgttcccggtgcaggaaacatgaccggaggtgtta 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1762 gcttgtcaccaagtggaggtagtgctgttcccggtgcaggaaacatgaccggaggtgtta 1821 Query: 108 atgattctgccatcccaggttctgacctgatgatgcattatccccaacagtatatgaacc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1822 atgattctgccatcccaggttctgacctgatgatgcattatccccaacagtatatgaacc 1881 Query: 168 ataatgggcaaaggccaatgttctggatgaatccggatttgaattctagtgccttttttt 227 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1882 ataatgggcaaaggccaatgttctggatgaatccggatttgaattctagtgccatcgacg 1941 Query: 228 acaccactgcaggcgaagatccgcagaatcaggattcctttgtgcgcggtgcatcattca 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1942 acaccactgcaggcgaagatccgcagaatcaggattcctttgtgcgcggtgcatcattca 2001 Query: 288 ctttagaatcttctgaacaggggaatgatgccaaggtgccaggtgctaacacttctagaa 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2002 ctttagaatcttctgaacaggggaatgatgccaaggtgccaggtgctaacacttctagaa 2061 Query: 348 gacaaactttccatgcagtgtcagctactgacttgttgaacaattctacttccagtccca 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2062 gacaaactttccatgcagtgtcagctactgacttgttgaacaattctacttccagtccca 2121 Query: 408 ctgaaacgacggatgccactggtaccaatgcatcagcaacatcacccgaagcttctgcct 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2122 ctgaaacgacggatgccactggtaccaatgcatcagcaacatcacccgaagcttctgcct 2181 Query: 468 cgaaaaaagagatgcaggatcgtgtttatcctcaagctgctgcttacccttacaccggtg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2182 cgaaaaaagagatgcaggatcgtgtttatcctcaagctgctgcttacccttacaccggtg 2241 Query: 528 cattgctgcaaccaaatcctgtactatctggccatccactgggtcatcatccccatccta 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2242 cattgctgcaaccaaatcctgtactatctggccatccactgggtcatcatccccatccta 2301 Query: 588 tcggttccccattccctggttacggttttaatacagctttctctcctgtcccgggcccta 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2302 tcggttccccattccctggttacggttttaatacagctttctctcctgtcccgggcccta 2361 Query: 648 ctaacacgttgaatgcaggttctccagccatctccgcagatggcaaagaagcaaacagca 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2362 ctaacacgttgaatgcaggttctccagccatctccgcagatggcaaagaagcaaacagca 2421 Query: 708 gcggcgatccaagtggccaatctaaccgtcatgtacactctggaactaattccccnagat 767 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2422 gcggcgatccaagtggccaatctaaccgtcatgtacactctggaactaattccccaggat 2481 Query: 768 tgagtcaacctggtagtctgccaatgtcaggacctaacccgtggatgtttgctgctcctc 827 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2482 tgagtcaacctggtagtctgccaatgtcaggacctaacccgtggatgtttgctgctcctc 2541 Query: 828 acggtagtcctaacttcctggttncacacnctcatcatnncggtcacgcaggcccttcag 887 ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||| Sbjct: 2542 acggtagtcctaacttcctggttccacaccctcatcatccgggtcacgcaggccctccag 2601 Query: 888 ctggccatcaaaga-cacaggagc-attaccctcaacataggaaacgtcatttcaataac 945 |||||||||||||| |||| |||| || ||||||||||||| |||||||||||||||||| Sbjct: 2602 ctggccatcaaagaccaca-gagcaataaccctcaacatagaaaacgtcatttcaataac 2660 Query: 946 a 946 | Sbjct: 2661 a 2661 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4471 Number of Sequences: 1807 Number of extensions: 4471 Number of successful extensions: 22 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)