BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC13ZD10FM1.SCF screened BAC_end
         (905 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1765                                                        1570   0.0  
3x_Contig1482                                                         168   1e-41
3x_Contig1769                                                         167   5e-41
3x_Contig1658                                                         161   3e-39
3x_Contig340                                                          157   5e-38

>3x_Contig1765 
          Length = 24733

 Score = 1570 bits (792), Expect = 0.0
 Identities = 814/820 (99%), Gaps = 1/820 (0%)
 Strand = Plus / Minus

                                                                         
Query: 87    caaatcattagttttttttttcaatatgaggaagaaacattccttcacatcgagcagcaa 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17196 caaatcattagttttttttttcaatatgaggaagaaacattccttcacatcgagcagcaa 17137

                                                                         
Query: 147   tggaagggatagataactattgtttcagcccgtttcacaacctctcctttcctgcgattt 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17136 tggaagggatagataactattgtttcagcccgtttcacaacctctcctttcctgcgattt 17077

                                                                         
Query: 207   accgcgttattgtaagatatgtttggaagttccccagagtgatttacttactaatatgaa 266
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17076 accgcgttattggaagatatgtttggaagttccccagagtgatttacttactaatatgaa 17017

                                                                         
Query: 267   ccactgtccaagtacttgtcacacggagcatatatgtagtcgcatgattatcattacgtt 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17016 ccactgtccaagtacttgtcacacggagcatatatgtagtcgcatgattatcattacgtt 16957

                                                                         
Query: 327   actgtaccccaaacttagtacaacagacatcaacaaatactaggcatcggtggtttagtg 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16956 actgtaccccaaacttagtacaacagacatcaacaaatactaggcatcggtggtttagtg 16897

                                                                         
Query: 387   gtaaaatccaacgttgccatcgttgggccccgggttcgattcccggccgatgcattcttt 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16896 gtaaaatccaacgttgccatcgttgggccccgggttcgattcccggccgatgcattcttt 16837

                                                                         
Query: 447   ttcattattcaataatttattgagcactcaatttttttatcaagcgttgctacctatttc 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16836 ttcattattcaataatttattgagcactcaatttttttatcaagcgttgctacctatttc 16777

                                                                         
Query: 507   ataaactgaatccactatagcatttcgattcattcaatgcaaattcaatagtatcggtaa 566
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16776 ataaactgaatccactatagcatttcgattcattcaatgcaaattcaatagtatcggtaa 16717

                                                                         
Query: 567   ggtttcactaacggctctcgatgtgtttcttactcgttttcttttattgtacagaaaacc 626
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16716 ggtttcactaacggctctcgatgtgtttcttactcgttttcttttattgtacagaaaacc 16657

                                                                         
Query: 627   catctttacaattctcagcatgaatccaacatttgaaaatcgaaagtgccaattcaattg 686
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16656 catctttacaattctcagcatgaatccaacatttgaaaatcgaaagtgccaattcaattg 16597

                                                                         
Query: 687   aaataagttaaaatgatgatgagaagttacaagtatattttgcgaagaatagtagataga 746
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16596 aaataagttaaaatgatgatgagaagttacaagtatattttgcgaagaatagtagataga 16537

                                                                         
Query: 747   tatcattgaacaaggtagttcaataacttgcctttgataacagacaagcacagaccaatt 806
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16536 tatcattgaacaaggtagttcaataacttgcctttgataacagacaagcacagaccaatt 16477

                                                                         
Query: 807   ggcaacggccagtcatgattcatgcagtattaatatgtattgtaagtgttaccaagcaat 866
             ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||
Sbjct: 16476 ggcaacggccagtcatgattcatgcagtattaatatgtatgtaaagtgttaccaagcaat 16417

                                                     
Query: 867   accctagaaatc-agctttactaccatttaatgatgatcc 905
             |||||||||||| |||||||||| ||||||||||||||||
Sbjct: 16416 accctagaaatcaagctttactaacatttaatgatgatcc 16377


>3x_Contig1482 
          Length = 10060

 Score =  168 bits (85), Expect = 1e-41
 Identities = 97/101 (96%)
 Strand = Plus / Plus

                                                                        
Query: 348  aacagacatcaacaaatactaggcatcggtggtttagtggtaaaatccaacgttgccatc 407
            |||| ||||||| || ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 7742 aacacacatcaataactactaagcatcggtggtttagtggtaaaatccaacgttgccatc 7801

                                                     
Query: 408  gttgggccccgggttcgattcccggccgatgcattcttttt 448
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 7802 gttgggccccgggttcgattcccggccgatgcattcttttt 7842


>3x_Contig1769 
          Length = 25795

 Score =  167 bits (84), Expect = 5e-41
 Identities = 93/96 (96%)
 Strand = Plus / Plus

                                                                        
Query: 353  acatcaacaaatactaggcatcggtggtttagtggtaaaatccaacgttgccatcgttgg 412
            ||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8285 acatcaaaaactactaagcatcggtggtttagtggtaaaatccaacgttgccatcgttgg 8344

                                                
Query: 413  gccccgggttcgattcccggccgatgcattcttttt 448
            ||||||||||||||||||||||||||||||||||||
Sbjct: 8345 gccccgggttcgattcccggccgatgcattcttttt 8380


>3x_Contig1658 
          Length = 13395

 Score =  161 bits (81), Expect = 3e-39
 Identities = 84/85 (98%)
 Strand = Plus / Plus

                                                                        
Query: 364  tactaggcatcggtggtttagtggtaaaatccaacgttgccatcgttgggccccgggttc 423
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4169 tactaagcatcggtggtttagtggtaaaatccaacgttgccatcgttgggccccgggttc 4228

                                     
Query: 424  gattcccggccgatgcattcttttt 448
            |||||||||||||||||||||||||
Sbjct: 4229 gattcccggccgatgcattcttttt 4253


>3x_Contig340 
          Length = 1690

 Score =  157 bits (79), Expect = 5e-38
 Identities = 79/79 (100%)
 Strand = Plus / Plus

                                                                       
Query: 370 gcatcggtggtttagtggtaaaatccaacgttgccatcgttgggccccgggttcgattcc 429
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gcatcggtggtttagtggtaaaatccaacgttgccatcgttgggccccgggttcgattcc 306

                              
Query: 430 cggccgatgcattcttttt 448
           |||||||||||||||||||
Sbjct: 307 cggccgatgcattcttttt 325


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8078
Number of Sequences: 1807
Number of extensions: 8078
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 5
length of query: 905
length of database: 10,358,551
effective HSP length: 16
effective length of query: 889
effective length of database: 10,329,639
effective search space: 9183049071
effective search space used: 9183049071
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)