BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZD10FM1.SCF screened BAC_end (905 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1765 1570 0.0 3x_Contig1482 168 1e-41 3x_Contig1769 167 5e-41 3x_Contig1658 161 3e-39 3x_Contig340 157 5e-38 >3x_Contig1765 Length = 24733 Score = 1570 bits (792), Expect = 0.0 Identities = 814/820 (99%), Gaps = 1/820 (0%) Strand = Plus / Minus Query: 87 caaatcattagttttttttttcaatatgaggaagaaacattccttcacatcgagcagcaa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17196 caaatcattagttttttttttcaatatgaggaagaaacattccttcacatcgagcagcaa 17137 Query: 147 tggaagggatagataactattgtttcagcccgtttcacaacctctcctttcctgcgattt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17136 tggaagggatagataactattgtttcagcccgtttcacaacctctcctttcctgcgattt 17077 Query: 207 accgcgttattgtaagatatgtttggaagttccccagagtgatttacttactaatatgaa 266 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17076 accgcgttattggaagatatgtttggaagttccccagagtgatttacttactaatatgaa 17017 Query: 267 ccactgtccaagtacttgtcacacggagcatatatgtagtcgcatgattatcattacgtt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17016 ccactgtccaagtacttgtcacacggagcatatatgtagtcgcatgattatcattacgtt 16957 Query: 327 actgtaccccaaacttagtacaacagacatcaacaaatactaggcatcggtggtttagtg 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16956 actgtaccccaaacttagtacaacagacatcaacaaatactaggcatcggtggtttagtg 16897 Query: 387 gtaaaatccaacgttgccatcgttgggccccgggttcgattcccggccgatgcattcttt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16896 gtaaaatccaacgttgccatcgttgggccccgggttcgattcccggccgatgcattcttt 16837 Query: 447 ttcattattcaataatttattgagcactcaatttttttatcaagcgttgctacctatttc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16836 ttcattattcaataatttattgagcactcaatttttttatcaagcgttgctacctatttc 16777 Query: 507 ataaactgaatccactatagcatttcgattcattcaatgcaaattcaatagtatcggtaa 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16776 ataaactgaatccactatagcatttcgattcattcaatgcaaattcaatagtatcggtaa 16717 Query: 567 ggtttcactaacggctctcgatgtgtttcttactcgttttcttttattgtacagaaaacc 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16716 ggtttcactaacggctctcgatgtgtttcttactcgttttcttttattgtacagaaaacc 16657 Query: 627 catctttacaattctcagcatgaatccaacatttgaaaatcgaaagtgccaattcaattg 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16656 catctttacaattctcagcatgaatccaacatttgaaaatcgaaagtgccaattcaattg 16597 Query: 687 aaataagttaaaatgatgatgagaagttacaagtatattttgcgaagaatagtagataga 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16596 aaataagttaaaatgatgatgagaagttacaagtatattttgcgaagaatagtagataga 16537 Query: 747 tatcattgaacaaggtagttcaataacttgcctttgataacagacaagcacagaccaatt 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16536 tatcattgaacaaggtagttcaataacttgcctttgataacagacaagcacagaccaatt 16477 Query: 807 ggcaacggccagtcatgattcatgcagtattaatatgtattgtaagtgttaccaagcaat 866 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 16476 ggcaacggccagtcatgattcatgcagtattaatatgtatgtaaagtgttaccaagcaat 16417 Query: 867 accctagaaatc-agctttactaccatttaatgatgatcc 905 |||||||||||| |||||||||| |||||||||||||||| Sbjct: 16416 accctagaaatcaagctttactaacatttaatgatgatcc 16377 >3x_Contig1482 Length = 10060 Score = 168 bits (85), Expect = 1e-41 Identities = 97/101 (96%) Strand = Plus / Plus Query: 348 aacagacatcaacaaatactaggcatcggtggtttagtggtaaaatccaacgttgccatc 407 |||| ||||||| || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 7742 aacacacatcaataactactaagcatcggtggtttagtggtaaaatccaacgttgccatc 7801 Query: 408 gttgggccccgggttcgattcccggccgatgcattcttttt 448 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 7802 gttgggccccgggttcgattcccggccgatgcattcttttt 7842 >3x_Contig1769 Length = 25795 Score = 167 bits (84), Expect = 5e-41 Identities = 93/96 (96%) Strand = Plus / Plus Query: 353 acatcaacaaatactaggcatcggtggtttagtggtaaaatccaacgttgccatcgttgg 412 ||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8285 acatcaaaaactactaagcatcggtggtttagtggtaaaatccaacgttgccatcgttgg 8344 Query: 413 gccccgggttcgattcccggccgatgcattcttttt 448 |||||||||||||||||||||||||||||||||||| Sbjct: 8345 gccccgggttcgattcccggccgatgcattcttttt 8380 >3x_Contig1658 Length = 13395 Score = 161 bits (81), Expect = 3e-39 Identities = 84/85 (98%) Strand = Plus / Plus Query: 364 tactaggcatcggtggtttagtggtaaaatccaacgttgccatcgttgggccccgggttc 423 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4169 tactaagcatcggtggtttagtggtaaaatccaacgttgccatcgttgggccccgggttc 4228 Query: 424 gattcccggccgatgcattcttttt 448 ||||||||||||||||||||||||| Sbjct: 4229 gattcccggccgatgcattcttttt 4253 >3x_Contig340 Length = 1690 Score = 157 bits (79), Expect = 5e-38 Identities = 79/79 (100%) Strand = Plus / Plus Query: 370 gcatcggtggtttagtggtaaaatccaacgttgccatcgttgggccccgggttcgattcc 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcatcggtggtttagtggtaaaatccaacgttgccatcgttgggccccgggttcgattcc 306 Query: 430 cggccgatgcattcttttt 448 ||||||||||||||||||| Sbjct: 307 cggccgatgcattcttttt 325 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8078 Number of Sequences: 1807 Number of extensions: 8078 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 5 length of query: 905 length of database: 10,358,551 effective HSP length: 16 effective length of query: 889 effective length of database: 10,329,639 effective search space: 9183049071 effective search space used: 9183049071 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)