BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC13ZE01FM1.SCF screened BAC_end
         (927 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig611                                                         1614   0.0  

>3x_Contig611 
          Length = 2628

 Score = 1614 bits (814), Expect = 0.0
 Identities = 834/838 (99%), Gaps = 2/838 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   tcgtatggtaaaaataaagtcataaattgtaagtgtctgtaaaacaagccaaggagttca 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934  tcgtatggtaaaaataaagtcataaattgtaagtgtctgtaaaacaagccaaggagttca 993

                                                                        
Query: 147  agttctgcctcattttgtttaagcatgtccttcttatatagacaagaatattcttcccag 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994  agttctgcctcattttgtttaagcatgtccttcttatatagacaagaatattcttcccag 1053

                                                                        
Query: 207  ccatttttttggtccataattccaggaatagcctgtacatttgcagtggatttctgaggt 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 ccatttttttggtccataattccaggaatagcctgtacatttgcagtggatttctgaggt 1113

                                                                        
Query: 267  gttctacccttgactgtaatttcaaatcttgatattagacaataacataaccataatcgt 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 gttctacccttgactgtaatttcaaatcttgatattagacaataacataaccataatcgt 1173

                                                                        
Query: 327  cttctataatttttatacctaggatcaattctcatgtttccagtcggttcaagaaattgt 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 cttctataatttttatacctaggatcaattctcatgtttccagtcggttcaagaaattgt 1233

                                                                        
Query: 387  gatggatccctatcaagacccagatcagaaaccaaaggtcccatcatgccaataacacct 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1234 gatggatccctatcaagacccagatcagaaaccaaaggtcccatcatgccaataacacct 1293

                                                                        
Query: 447  tcggatgttgaatcgtagaatatactacataggtcaggttgatgagcaaggatgttccaa 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1294 tcggatgttgaatcgtagaatatactacataggtcaggttgatgagcaaggatgttccaa 1353

                                                                        
Query: 507  agcagcatgtgccaagaaataacttcttcagttcttgactgatagatgttcaatatcgac 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1354 agcagcatgtgccaagaaataacttcttcagttcttgactgatagatgttcaatatcgac 1413

                                                                        
Query: 567  actaattcagcggcagaagatgttaattttttctccagttctgcaaacccttcgatccaa 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1414 actaattcagcggcagaagatgttaattttttctccagttctgcaaacccttcgatccaa 1473

                                                                        
Query: 627  gccctgtcgccatcgtatttatgttgaacatcctgttccatagccctttgatcgaaaagc 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1474 gccctgtcgccatcgtatttatgttgaacatcctgttccatagccctttgatcgaaaagc 1533

                                                                        
Query: 687  cgtagtttccaatgtgatatggatagttgaagtattagataaagaatagagatgttcact 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1534 cgtagtttccaatgtgatatggatagttgaagtattagataaagaatagagatgttcact 1593

                                                                        
Query: 747  aacttcattttgatattagtggtaccgggattcactattatccgctctggattatgtgaa 806
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1594 aacttcattttgatattagtggtaccgggattcactattatccgctctggattatgtgaa 1653

                                                                        
Query: 807  tccatgtggatcacttcgttaagattttctt-aaagagatcgatatcgatacatggccat 865
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1654 tccatgtggatcacttcgttaagattttcttcaaagagatcgatatcgatacatggccat 1713

                                                                      
Query: 866  atcgggtaaatgttgttggtagaagttatccaaaagtagtcttatattgggtaaagaa 923
            |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1714 atcgggtaaatg-tggtggtagaagttatccaaaagtagtctaatattgggtaaagaa 1770


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6683
Number of Sequences: 1807
Number of extensions: 6683
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 927
length of database: 10,358,551
effective HSP length: 16
effective length of query: 911
effective length of database: 10,329,639
effective search space: 9410301129
effective search space used: 9410301129
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)