BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZE01FM1.SCF screened BAC_end (927 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig611 1614 0.0 >3x_Contig611 Length = 2628 Score = 1614 bits (814), Expect = 0.0 Identities = 834/838 (99%), Gaps = 2/838 (0%) Strand = Plus / Plus Query: 87 tcgtatggtaaaaataaagtcataaattgtaagtgtctgtaaaacaagccaaggagttca 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 934 tcgtatggtaaaaataaagtcataaattgtaagtgtctgtaaaacaagccaaggagttca 993 Query: 147 agttctgcctcattttgtttaagcatgtccttcttatatagacaagaatattcttcccag 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 994 agttctgcctcattttgtttaagcatgtccttcttatatagacaagaatattcttcccag 1053 Query: 207 ccatttttttggtccataattccaggaatagcctgtacatttgcagtggatttctgaggt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 ccatttttttggtccataattccaggaatagcctgtacatttgcagtggatttctgaggt 1113 Query: 267 gttctacccttgactgtaatttcaaatcttgatattagacaataacataaccataatcgt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1114 gttctacccttgactgtaatttcaaatcttgatattagacaataacataaccataatcgt 1173 Query: 327 cttctataatttttatacctaggatcaattctcatgtttccagtcggttcaagaaattgt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1174 cttctataatttttatacctaggatcaattctcatgtttccagtcggttcaagaaattgt 1233 Query: 387 gatggatccctatcaagacccagatcagaaaccaaaggtcccatcatgccaataacacct 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1234 gatggatccctatcaagacccagatcagaaaccaaaggtcccatcatgccaataacacct 1293 Query: 447 tcggatgttgaatcgtagaatatactacataggtcaggttgatgagcaaggatgttccaa 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1294 tcggatgttgaatcgtagaatatactacataggtcaggttgatgagcaaggatgttccaa 1353 Query: 507 agcagcatgtgccaagaaataacttcttcagttcttgactgatagatgttcaatatcgac 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1354 agcagcatgtgccaagaaataacttcttcagttcttgactgatagatgttcaatatcgac 1413 Query: 567 actaattcagcggcagaagatgttaattttttctccagttctgcaaacccttcgatccaa 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1414 actaattcagcggcagaagatgttaattttttctccagttctgcaaacccttcgatccaa 1473 Query: 627 gccctgtcgccatcgtatttatgttgaacatcctgttccatagccctttgatcgaaaagc 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1474 gccctgtcgccatcgtatttatgttgaacatcctgttccatagccctttgatcgaaaagc 1533 Query: 687 cgtagtttccaatgtgatatggatagttgaagtattagataaagaatagagatgttcact 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1534 cgtagtttccaatgtgatatggatagttgaagtattagataaagaatagagatgttcact 1593 Query: 747 aacttcattttgatattagtggtaccgggattcactattatccgctctggattatgtgaa 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1594 aacttcattttgatattagtggtaccgggattcactattatccgctctggattatgtgaa 1653 Query: 807 tccatgtggatcacttcgttaagattttctt-aaagagatcgatatcgatacatggccat 865 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1654 tccatgtggatcacttcgttaagattttcttcaaagagatcgatatcgatacatggccat 1713 Query: 866 atcgggtaaatgttgttggtagaagttatccaaaagtagtcttatattgggtaaagaa 923 |||||||||||| || |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1714 atcgggtaaatg-tggtggtagaagttatccaaaagtagtctaatattgggtaaagaa 1770 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6683 Number of Sequences: 1807 Number of extensions: 6683 Number of successful extensions: 27 Number of sequences better than 1.0e-20: 1 length of query: 927 length of database: 10,358,551 effective HSP length: 16 effective length of query: 911 effective length of database: 10,329,639 effective search space: 9410301129 effective search space used: 9410301129 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)