BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZE03RM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1521 1653 0.0 >3x_Contig1521 Length = 8057 Score = 1653 bits (834), Expect = 0.0 Identities = 889/902 (98%), Gaps = 4/902 (0%) Strand = Plus / Minus Query: 45 ctttttcctcagaatagatactcttattttcatagacttccataggcactatacctttaa 104 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1318 ctttttcctcagaatagatactctcattttcatagacttccataggcactatacctttaa 1259 Query: 105 aggcaccattacagagatctacaacctgctctaggtataccttgagctgttcttcccagg 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1258 aggcaccattacagagatctacaacctgctctaggtataccttgagctgttcttcccagg 1199 Query: 165 tcactggctttacggcgtccatggttttgatgctttctatgctcacatcagttggtatca 224 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1198 tcactggctttacggcgtccatggttttgatgctttctatgctcacatcagctggtatca 1139 Query: 225 aatcgttataaatgaaatcgttgtccttaattaaacttttcaacttctcttctattactg 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1138 aatcgttataaatgaaatcgttgtccttaattaaacttttcaacttctcttctattactg 1079 Query: 285 cttttaaccctgttagatcaatctcatccttcacatataccttatagaaaccagcctctt 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1078 cttttaaccctgttagatcaatctcatccttcacatataccttatagaaaccagcctctt 1019 Query: 345 ttatttcatgtaccgcaagcttaccataagctatcgcctctccaattttcttagcttcct 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1018 ttatttcatgtaccgcaagcttaccataagctatcgcctctccaattttcttagcttcct 959 Query: 405 ctagcactctcaagtgattgtatgtcgaaatagccctatacaagtgaacctttagggtaa 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 958 ctagcactctcaagtgattgtatgtcgaaatagccctatacaagtgaacctttagggtaa 899 Query: 465 ttatatccttccatttgtcttctccataaggcgtagtcccaaaagttgctgttgaactat 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 898 ttatatccttccatttgtcttctccataaggcgtagtcccaaaagttgctgttgaactat 839 Query: 525 cctcataaaattcttgacatttctcatacaaatttaaggcagtatgtgctagtttgctga 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 838 cctcataaaattcttgacatttctcatacaaatttaaggcagtatgtgctagtttgctga 779 Query: 585 tcaaagatgctcttttcgaagcatctggtccattaatcaacgtcatgagaaacatttcct 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 tcaaagatgctcttttcgaagcatctggtccattaatcaacgtcatgagaaacatttcct 719 Query: 645 gagcttcggcgtgcaacaatgtggagagaaaagatgtattttctgctgcacaatcgatag 704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 gagcttcggcgtgcaacaatgtggagagaaaagatgtattttctgctgcacaatcgatag 659 Query: 705 aaggtgaattcaaaaagttgttcgacatataatcgaagcaagccattgccttgctcaaat 764 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 aaggtgaattcaaaaagttgttcgacatataatcgaagcaagccattgccttgctcaaat 599 Query: 765 aaggaatcgcgctcttataattatcagacatttttttcttagcgatttgagacattagga 824 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 598 aaggaatcgcgctcttataattatcagacatttttttcttagcgatttgagacaatagaa 539 Query: 825 cacccgatgttgtacattgacagatgatttctcaaagactacagtatgttgccttgaaat 884 || ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| | Sbjct: 538 ca-ccgatgttgtaca-tgacagatgatttctcaaagactacagtatgttg-cttgaatt 482 Query: 885 ttttttctgacaacctaaatggatattctgcttcataccacgtgaaaatccatctgttat 944 ||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| || Sbjct: 481 ttttttctgacaacctagagtgatattctgcttcataccacgtg-aaatccatctgtaat 423 Query: 945 ga 946 || Sbjct: 422 ga 421 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7079 Number of Sequences: 1807 Number of extensions: 7079 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)