BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZE05RM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1739 1701 0.0 >3x_Contig1739 Length = 22061 Score = 1701 bits (858), Expect = 0.0 Identities = 891/897 (99%), Gaps = 4/897 (0%) Strand = Plus / Minus Query: 43 gcttgagttt-acacagttgtggcaaatgtttggtgaaggtaagattgatagattcaaca 101 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2750 gcttgagtttcacacagttgtggcaaatgtttggtgaaggtaagattgatagattcaaca 2691 Query: 102 atattttactgaataaattggcgccatatctttcatcaaacgcatttcaatactggttcg 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2690 atattttactgaataaattggcgccatatctttcatcaaacgcatttcaatactggttcg 2631 Query: 162 aaaatggaacgaaaacatttgatcctaatggagccgggttgtatgacactgggttcacaa 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2630 aaaatggaacgaaaacatttgatcctaatggagccgggttgtatgacactgggttcacaa 2571 Query: 222 agtgggcattaagacttgcaaaatgggtattcaaagttgcaaatcttacagatgaagtta 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2570 agtgggcattaagacttgcaaaatgggtattcaaagttgcaaatcttacagatgaagtta 2511 Query: 282 atatgctatgcaaagctaagaccctagaggagcaaagatctatttgggataaaaagataa 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2510 atatgctatgcaaagctaagaccctagaggagcaaagatctatttgggataaaaagataa 2451 Query: 342 agccggtccttttcaacagagtagtgggtaaaatcctcgttggaaacccgttatttttat 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2450 agccggtccttttcaacagagtagtgggtaaaatcctcgttggaaacccgttatttttat 2391 Query: 402 ggagtgcacttggagtaccacgtaatcaagcaaaaatgatgggctcttcaacattgcaat 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2390 ggagtgcacttggagtaccacgtaatcaagcaaaaatgatgggctcttcaacattgcaat 2331 Query: 462 atattattgacactttggaccctgttattgataattctttgatttccgatgataattact 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2330 atattattgacactttggaccctgttattgataattctttgatttccgatgataattact 2271 Query: 522 tttattatttgacattgaagggaagatattcgagtagaagttgtcctgattacct-aaaa 580 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2270 tttattatttgacattgaagggaagatattcgagtagaagttgtcctgattacctgaaaa 2211 Query: 581 gagggtggattcaagtctctttctcgtgaaagtcctgaatctcctctagatagagttaga 640 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2210 gagggtggattcaagtctctttctcgtgaaagtcctgaatctcctctagatagagttaga 2151 Query: 641 cttcatactgacacgttgaaggatgtctgtgagcgtttgtcgaagaaaacagtttcgatt 700 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2150 cttcatactgacacgttgaaggatgtctgtgagcgtttgtcgaagaaaacagtttcgatt 2091 Query: 701 gctataattatggatcacatggattggtttgatccacaaggaactgatgttgacgaagaa 760 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2090 gctataattatggatcacatggattggtttgatccacaaggaactgatgttgacgaagaa 2031 Query: 761 attcaggctttgtggttggccctcaactctcgcggtagggtattattgagatctgcctct 820 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2030 attcaggctttgtggttggccctcaactctcgcggtagggtattattgagatctgcctct 1971 Query: 821 aaaagcccatggtatatcaaaaacttcgaaaagttncggcttcagttgttaagcagtaag 880 ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1970 aaaagcccatggtatatcaaaaacttcgaaaagtt-cggcttcagttgtaaagcagtaag 1912 Query: 881 tgcaagataccctggnaaatgtattgatagagttaacatgtatgccagtacctgggt 937 ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct: 1911 tgcaagataccctggaaaatgtattgatagagttaacatgtatg-cagtacctgggt 1856 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6915 Number of Sequences: 1807 Number of extensions: 6915 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)