BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZE08FM1.SCF screened BAC_end (936 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1252 1643 0.0 >3x_Contig1252 Length = 5616 Score = 1643 bits (829), Expect = 0.0 Identities = 847/851 (99%), Gaps = 2/851 (0%) Strand = Plus / Minus Query: 87 tacaaatgtgtcattaaaagaaaccccgtaagtttctttcatcctttcacggactaataa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4139 tacaaatgtgtcattaaaagaaaccccgtaagtttctttcatcctttcacggactaataa 4080 Query: 147 ggtggcttcgtagcgcttattggaggagaacccgacgaagaacgggtcaatctgtttcct 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4079 ggtggcttcgtagcgcttattggaggagaacccgacgaagaacgggtcaatctgtttcct 4020 Query: 207 gtactgttttttcaaactgtaagtaccggtatcgaaattaccggtcggctcatggtaatc 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4019 gtactgttttttcaaactgtaagtaccggtatcgaaattaccggtcggctcatggtaatc 3960 Query: 267 actgtactggtttaaatacaagtcaaatgcaggatgcttagtaacgtgttcagggattgc 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3959 actgtactggtttaaatacaagtcaaatgcaggatgcttagtaacgtgttcagggattgc 3900 Query: 327 ctcaactaatgaactataactgcactttcgaaaacagagagagtggataatttctgattt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3899 ctcaactaatgaactataactgcactttcgaaaacagagagagtggataatttctgattt 3840 Query: 387 catagtactttcgaaaccttcaactgaagtcgaagcacatagagctctagtttctgtcat 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3839 catagtactttcgaaaccttcaactgaagtcgaagcacatagagctctagtttctgtcat 3780 Query: 447 taaacgtattaaagtaaggaaacattgttctgtcatggcgattgtcaaactctcttctgg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3779 taaacgtattaaagtaaggaaacattgttctgtcatggcgattgtcaaactctcttctgg 3720 Query: 507 gtagtcacctattggaattccttctgcccagtatttgagtccccatcgcgttagaaaatt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3719 gtagtcacctattggaattccttctgcccagtatttgagtccccatcgcgttagaaaatt 3660 Query: 567 aaccatgaaatcatgtggatccgcataacacattgaaaactgaacgaggaaaaaatcact 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3659 aaccatgaaatcatgtggatccgcataacacattgaaaactgaacgaggaaaaaatcact 3600 Query: 627 aaagtaagtgaattcacgcatgctgtattttgtatacattttcaattgatgctgaattgg 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3599 aaagtaagtgaattcacgcatgctgtattttgtatacattttcaattgatgctgaattgg 3540 Query: 687 agagccattgcgtacccaaaacccaacatcaatctgtgatatcataactaaagtgcagag 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3539 agagccattgcgtacccaaaacccaacatcaatctgtgatatcataactaaagtgcagag 3480 Query: 747 ggcctgttctgctatccaaagacattcagttggagatttaaaaaattccttgaaattgaa 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3479 ggcctgttctgctatccaaagacattcagttggagatttaaaaaattccttgaaattgaa 3420 Query: 807 gtaatctttgagcgtctctggaaggggttcgtatctgccacatttgact-cactgnagta 865 |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||| Sbjct: 3419 gtaatctttgagcgtctctggaaggggttcgtatctgccaca-ttgactccactgaagta 3361 Query: 866 tgaatntaatgtaatacgatatcggattgaaaaaattctgggtttctgatccaactttga 925 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3360 tgaatttaatgtaatacgatatcggattgaaaaaattctgggtttctgatccaactttga 3301 Query: 926 agttaaaaatt 936 ||||||||||| Sbjct: 3300 agttaaaaatt 3290 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6079 Number of Sequences: 1807 Number of extensions: 6079 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 936 length of database: 10,358,551 effective HSP length: 16 effective length of query: 920 effective length of database: 10,329,639 effective search space: 9503267880 effective search space used: 9503267880 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)