BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZE11FM1.SCF screened BAC_end (940 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1709 1540 0.0 >3x_Contig1709 Length = 16948 Score = 1540 bits (777), Expect = 0.0 Identities = 828/837 (98%), Gaps = 6/837 (0%) Strand = Plus / Minus Query: 86 cagcagccaagaatttccagttggactcagggtcattaggatcgacaaagcctgttggat 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8820 cagcagccaagaatttccagttggactcagggtcattaggatcgacaaagcctgttggat 8761 Query: 146 gaacctgaatttggtccatatcaattaatttagcacctagcctttctagtaaaacctgcc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8760 gaacctgaatttggtccatatcaattaatttagcacctagcctttctagtaaaacctgcc 8701 Query: 206 cttcacccaaagtctgatcaccgtttgtggttggtaaatcgactagatgtggggcatatt 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8700 cttcacccaaagtctgatcaccgtttgtggttggtaaatcgactagatgtggggcatatt 8641 Query: 266 tttccaacaacttcttgttgaaaccaaatccacctgtacagaacacgacattgtttgttt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8640 tttccaacaacttcttgttgaaaccaaatccacctgtacagaacacgacattgtttgttt 8581 Query: 326 caatggaatgtgttccttctgaatcctcgtagactacaccatttaccttattattctcat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8580 caatggaatgtgttccttctgaatcctcgtagactacaccatttaccttattattctcat 8521 Query: 386 caagtttgacatcaattaccttgctattcaattggatcttgacgagatctgcgccatacg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8520 caagtttgacatcaattaccttgctattcaattggatcttgacgagatctgcgccatacg 8461 Query: 446 attgtaacgattttttcaaagtgtctacaatctggaaaccgggtggcagtttcccgctag 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8460 attgtaacgattttttcaaagtgtctacaatctggaaaccgggtggcagtttcccgctag 8401 Query: 506 atctatgggttcttgaaaccgaatgaccacccaattgggcaagtttatccaacggaatct 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8400 atctatgggttcttgaaaccgaatgaccacccaattgggcaagtttatccaacggaatct 8341 Query: 566 gatgctcagtttgtagccaagaaatagcattcgctgaatctttggccaacttctccatca 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8340 gatgctcagtttgtagccaagaaatagcattcgctgaatctttggccaacttctccatca 8281 Query: 626 atgtcacaatacctttccctctagcagatttgatcgtatcatctgcaaataactccggat 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8280 atgtcacaatacctttccctctagcagatttgatcgtatcatctgcaaataactccggat 8221 Query: 686 tatcaattatcttaagtttttcttgagtgtcggtaccagcaccattaataccgcttgacg 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8220 tatcaattatcttaagtttttcttgagtgtcggtaccagcaccattaataccgcttgacg 8161 Query: 746 ccttgatcgaattaccaccaatgcttcctgtcttttcc-ataaaactattggaatattaa 804 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 8160 ccttgatcgaattaccaccaatgcttcctgtcttttccaataaaactattggaatattaa 8101 Query: 805 acttcactaggttgggtagagggtcgttaatccagctaatcctgatcctataactacaac 864 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 8100 acttcacta-gttgggtaga-ggtcgttaatccagctaatcctgatcctataactacaac 8043 Query: 865 gggttttagacttgggtggcttgattcttttgaaaacaacgagttgaccaaatatac 921 ||| ||||||| | ||| ||||||||| |||||||||||||||| |||||||||||| Sbjct: 8042 ggg-tttagacat-ggttgcttgattc-tttgaaaacaacgagtagaccaaatatac 7989 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6428 Number of Sequences: 1807 Number of extensions: 6428 Number of successful extensions: 44 Number of sequences better than 1.0e-20: 1 length of query: 940 length of database: 10,358,551 effective HSP length: 16 effective length of query: 924 effective length of database: 10,329,639 effective search space: 9544586436 effective search space used: 9544586436 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)