BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZE12RM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1690 1459 0.0 >3x_Contig1690 Length = 13018 Score = 1459 bits (736), Expect = 0.0 Identities = 836/860 (97%), Gaps = 7/860 (0%) Strand = Plus / Plus Query: 66 aatctgtactgccacaaaaaaaagataatctcgtcttagaaaatattcgcagtaccgttc 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8158 aatctgtactgccacaaaaaaaagataatctcgtcttagaaaatattcgcagtaccgttc 8217 Query: 126 agtacatagaaatcattgcggacatcaaatatgtaccagacactttacgaacagaattcc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8218 agtacatagaaatcattgcggacatcaaatatgtaccagacactttacgaacagaattcc 8277 Query: 186 gaactgcaccatacatttttgtgtcgcttcttctttcgtaattccaagatggagatagac 245 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 8278 gaactgcaccatacatttttgtgtcgcttcgtctttcgtaattccaagatggagatagac 8337 Query: 246 acagagggaaaatggacagaagaactagcggaaaacccgtactgcagcgacaccatctat 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8338 acagagggaaaatggacagaagaactagcggaaaacccgtactgcagcgacaccatctat 8397 Query: 306 atcttggtatcgctgcattggaaaagatgtcggtttctttgactaatagcagttgaatga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8398 atcttggtatcgctgcattggaaaagatgtcggtttctttgactaatagcagttgaatga 8457 Query: 366 aagggataaatatgattaacgccacaggttggagctctgatctttaagagggaggggaca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8458 aagggataaatatgattaacgccacaggttggagctctgatctttaagagggaggggaca 8517 Query: 426 tatgccattattacatactgtcatacaaaaaattttgatgtttctctccgctcattctta 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8518 tatgccattattacatactgtcatacaaaaaattttgatgtttctctccgctcattctta 8577 Query: 486 gccgcacacgtacacgaagtacgaaagtactcagcaaagacagaatatcggtctctcgtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8578 gccgcacacgtacacgaagtacgaaagtactcagcaaagacagaatatcggtctctcgtt 8637 Query: 546 tgtttggaatcagcgaataattgattatatctgatccttgtttcttcatgctgacgtcta 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8638 tgtttggaatcagcgaataattgattatatctgatccttgtttcttcatgctgacgtcta 8697 Query: 606 tatttttccttttttttcgatccttctcttttctcttatttaggtatcattaagaaattg 665 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8698 tatttttccttttttttcgatccttctcttttctcttatttaggtatcattaagaaattg 8757 Query: 666 tgttttttccgtagaaacg-aataaaaaaaactgatatttcgaaagaagatataag-ata 723 ||||||||||||||||||| || ||||||||||||||| ||||||||||||||||| | | Sbjct: 8758 tgttttttccgtagaaacgaaaaaaaaaaaactgatatatcgaaagaagatataagaaaa 8817 Query: 724 gctttgatagaaacacatataagagat-cgggaaggatttatcaactggacttttcgtac 782 ||||||||||||||||| ||||||||| ||| ||| |||||||||||| |||| |||||| Sbjct: 8818 gctttgatagaaacacaaataagagatacggaaagaatttatcaactgaacttctcgtac 8877 Query: 783 tgttttaacttcgatatcccatcaggtttaatcatttaattggaaaagctaatacatttt 842 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 8878 tgttttaacttcgatatcccatcaggtttaatcatttaattggaaaagctaataca-ttt 8936 Query: 843 caggatacaaggctggcgcgtttaatattaccctttgaaaacttaatatttcttgatacc 902 ||||||||| ||| ||||||||||||| | ||| ||||| ||||| ||||||||||| Sbjct: 8937 caggatacagcgct-gcgcgtttaatatca-cctctgaaactataata-ttcttgatacc 8993 Query: 903 aagcttaaaaaaaaagaaaa 922 ||||| |||||||||||||| Sbjct: 8994 aagctaaaaaaaaaagaaaa 9013 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9658 Number of Sequences: 1807 Number of extensions: 9658 Number of successful extensions: 74 Number of sequences better than 1.0e-20: 1 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)