BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZF04FM1.SCF screened BAC_end (920 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig890 1251 0.0 3x_Contig1423 375 e-103 >3x_Contig890 Length = 3684 Score = 1251 bits (631), Expect = 0.0 Identities = 664/670 (99%), Gaps = 4/670 (0%) Strand = Plus / Minus Query: 251 ttaaaactctcaaaaattctaaaccaatgacttgttggtcttgttcgaatcgaatagacg 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3684 ttaaaactctcaaaaattctaaaccaatgacttgttggtcttgttcgaatcgaatagacg 3625 Query: 311 gtgataactcggccattaactggtatccattaagaacttttcttacaggctatatttata 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3624 gtgataactcggccattaactggtatccattaagaacttttcttacaggctatatttata 3565 Query: 371 gataaaataaagtttcatagtagcatctaagtgcatttctctcatgtgtgtttctcgagg 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3564 gataaaataaagtttcatagtagcatctaagtgcatttctctcatgtgtgtttctcgagg 3505 Query: 431 ctttctctttaccatggacgaagtacagtaaagagtttcattcagttgattaaggcatgt 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3504 ctttctctttaccatggacgaagtacagtaaagagtttcattcagttgattaaggcatgt 3445 Query: 491 ttaccgcgtgagtcgaacacctaaatatgagactcagaggcttaaatgaaaacagtaatt 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3444 ttaccgcgtgagtcgaacacctaaatatgagactcagaggcttaaatgaaaacagtaatt 3385 Query: 551 cattatgtaagaggagtatgcgttaagcattggtcaaatagtgaagcagtttaagactaa 610 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3384 cattatgtaagaggagtatgcgttaagcattggtcaaatagtgaagcagtttaagactaa 3325 Query: 611 ccactaccatttctgcgtttagttaacggtttcttttccatttagtaaatgtcattacgt 670 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3324 ccactaccatttctgcgtttagttaacggtttcttttccatttagtaaatgtcattacgt 3265 Query: 671 atttttttctgtcagcatgcaaagtgtaaacattggatatcaaaggaaaaagtttatatt 730 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3264 atttttttctgtcagcatgcaaagtgtaaacattggatatcaaaggaaaaagtttatatt 3205 Query: 731 aagaaacgttaaccgttaaaagcatctgttcatttaaagagcacatatcatagcttgcct 790 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3204 aagaaacgttaaccgttaaaagcatctgttcatttaaagagcacatatcatagcttgcct 3145 Query: 791 gaattcattggccgncaaagctttcgagaatgaaactatcactatctacattactacgtt 850 |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 3144 gaattcattggccgccaaagctttcgagaatgaagctatcactatctacattactacgtt 3085 Query: 851 ggtttactaagttttgggatagcattagcatttcaagat-acttgct-aaaaaatgctct 908 || |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 3084 gg-ttactaagttttgggatagcattagcatttcaagatgacttgctaaaaaaatgctct 3026 Query: 909 -aatcaggat 917 ||||||||| Sbjct: 3025 caatcaggat 3016 >3x_Contig1423 Length = 8454 Score = 375 bits (189), Expect = e-103 Identities = 189/189 (100%) Strand = Plus / Minus Query: 88 tagttccgttttgttcctggttaattcttttctgagtttatctatctgcgaactaacaat 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 tagttccgttttgttcctggttaattcttttctgagtttatctatctgcgaactaacaat 130 Query: 148 tggaatatcgcccaaaacgtctttgattggtggtaaatttgcctgctctgcattatcgca 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 tggaatatcgcccaaaacgtctttgattggtggtaaatttgcctgctctgcattatcgca 70 Query: 208 gctaattggtgcaagcgtggctactacttccatgattaccaagttaaaactctcaaaaat 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69 gctaattggtgcaagcgtggctactacttccatgattaccaagttaaaactctcaaaaat 10 Query: 268 tctaaacca 276 ||||||||| Sbjct: 9 tctaaacca 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6257 Number of Sequences: 1807 Number of extensions: 6257 Number of successful extensions: 37 Number of sequences better than 1.0e-20: 2 length of query: 920 length of database: 10,358,551 effective HSP length: 16 effective length of query: 904 effective length of database: 10,329,639 effective search space: 9337993656 effective search space used: 9337993656 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)