BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZF09FM1.SCF screened BAC_end (1026 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1619 724 0.0 >3x_Contig1619 Length = 7770 Score = 724 bits (365), Expect = 0.0 Identities = 414/429 (96%), Gaps = 1/429 (0%) Strand = Plus / Plus Query: 85 taaccattaagctataaaaactatatatttgaagggaataggaatcgaacctatgaagaa 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4587 taaccattaagctataaaaactatatatttgaagggaataggaatcgaacctatgaagaa 4646 Query: 145 cacagtcattgagtttacagctcaactccaattaccaacattggagatccctcctatata 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4647 cacagtcattgagtttacagctcaactccaattaccaacattggagatccctcctatata 4706 Query: 205 aatatatatataatatatatatattaaccccgcggatatatcccgatattatcgggatat 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4707 aatatatatataatatatatatattaaccccgcggatatatcccgatattatcgggatat 4766 Query: 265 atccgtggggactataaatagtttttcctaatttacttataatttcccattatactataa 324 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4767 atccgcggggactataaatagtttttcctaatttacttataatttcccattatactataa 4826 Query: 325 tatatatactatatattataagccccgcggtatcacctaaccattcggtatgatgatatc 384 ||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| | Sbjct: 4827 tatatatactatatattataagccccgcggtatcacccaaccatccggtaagatgatacc 4886 Query: 385 gtgggggaataaatatataattaccccttcttcttaatattttataagaatgtgaaatat 444 | ||||||| |||||||||||||||||||| ||| |||||| |||||||||| ||||||| Sbjct: 4887 gcgggggaaaaaatatataattaccccttc-tctaaatattctataagaatgagaaatat 4945 Query: 445 atttaattatattatatatattatatatattaaccctgctcgacatctcccaacctctcg 504 ||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||| Sbjct: 4946 atttaattatattatatatataatatatattaaccctgcgcgacatcgcccaacctttcg 5005 Query: 505 gttgggtgt 513 ||||||||| Sbjct: 5006 gttgggtgt 5014 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 16,746 Number of Sequences: 1807 Number of extensions: 16746 Number of successful extensions: 403 Number of sequences better than 1.0e-20: 1 length of query: 1026 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1010 effective length of database: 10,329,639 effective search space: 10432935390 effective search space used: 10432935390 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)