BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZG02FM1.SCF screened BAC_end (954 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1340 1511 0.0 >3x_Contig1340 Length = 7156 Score = 1511 bits (762), Expect = 0.0 Identities = 820/830 (98%), Gaps = 7/830 (0%) Strand = Plus / Plus Query: 87 atttagcctccgatagtgaagaatctgaagttgagcatgatgatcaagttaaaaataaac 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 atttagcctccgatagtgaagaatctgaagttgagcatgatgatcaagttaaaaataaac 734 Query: 147 tcaaggctttagtaatggattccgtaaaagtggggcaaaagtcactatttgatcaaaagg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 tcaaggctttagtaatggattccgtaaaagtggggcaaaagtcactatttgatcaaaagg 794 Query: 207 aagatgaagacgataatgaggctgatatggaaataactttcactccaggcctggatgagt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 aagatgaagacgataatgaggctgatatggaaataactttcactccaggcctggatgagt 854 Query: 267 ctggccaacaagataccaatgataacgaagaggaaagcaccattgataagattagacgta 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 ctggccaacaagataccaatgataacgaagaggaaagcaccattgataagattagacgta 914 Query: 327 aagaaaaagaaagacgtaagaagagaaaggacagagtcaaggagcttaagaaggaatcag 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 915 aagaaaaagaaagacgtaagaagagaaaggacagagtcaaggagcttaagaaggaatcag 974 Query: 387 aagccaaattaaaggagaaccttaagaagaagaaagatacttctcacagcatcgatgacg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 aagccaaattaaaggagaaccttaagaagaagaaagatacttctcacagcatcgatgacg 1034 Query: 447 ataagaaaaagggagagttagagctcttaatgctagatgaaaatgagggtgaatcaacaa 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1035 ataagaaaaagggagagttagagctcttaatgctagatgaaaatgagggtgaatcaacaa 1094 Query: 507 ttaacaacaaggcacacttcaacatgaatgagattctcaaatctgagaaggaaaaatcca 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1095 ttaacaacaaggcacacttcaacatgaatgagattctcaaatctgagaaggaaaaatcca 1154 Query: 567 aaaaggccaagtatcaaaacaaggagaagattgtggatgatgaattcactccagacgtta 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1155 aaaaggccaagtatcaaaacaaggagaagattgtggatgatgaattcactccagacgtta 1214 Query: 627 atgatccaagatttaaagaggtctttgaagatcacgatttcgcgattgatcctactcaac 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1215 atgatccaagatttaaagaggtctttgaagatcacgatttcgcgattgatcctactcaac 1274 Query: 687 cagagttcaagaagacaccagctatggagaagattttaaaggaacgtacagtacgttcaa 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1275 cagagttcaagaagacaccagctatggagaagattttaaaggaacgtacagtacgttcaa 1334 Query: 747 gcaaaaaatctatgggcaataagcgtaaccacgaaattgcaaatactgaacatagtaaag 806 |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1335 gcaaaaaatctaggggcaaaaagcgtaaccacgaaattgcaaatactgaacatagtaaag 1394 Query: 807 acttaaat-agatcggtcggtttagttgaaaaaacttaa-gccaagaacaaaagaacaaa 864 || ||||| ||||||| ||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 1395 acataaataagatcgg-cggtttagttg-aaaaacttaaggccaagaacaaaagaacaaa 1452 Query: 865 acactaattttgcaaaccttgtggacactttatatcaaccccaaagacgt 914 ||||||| |||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 1453 acactaa-tttgcaaa-cttgtggacactttatatcaa-cccaaagacgt 1499 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8789 Number of Sequences: 1807 Number of extensions: 8789 Number of successful extensions: 72 Number of sequences better than 1.0e-20: 1 length of query: 954 length of database: 10,358,551 effective HSP length: 16 effective length of query: 938 effective length of database: 10,329,639 effective search space: 9689201382 effective search space used: 9689201382 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)