BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZG03FM1.SCF screened BAC_end (944 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1590 1592 0.0 >3x_Contig1590 Length = 13653 Score = 1592 bits (803), Expect = 0.0 Identities = 850/858 (99%), Gaps = 6/858 (0%) Strand = Plus / Plus Query: 86 cgaaaactgaaatccagttacagcttttatgatagaagcggtaaatgaagataaactgtc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3894 cgaaaactgaaatccagttacagcttttatgatagaagcggtaaatgaagataaactgtc 3953 Query: 146 gcgagtagttaagtattcagtggaaggcgacccaaggcgattttcgatttaggaagtaaa 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3954 gcgagtagttaagtattcagtggaaggcgacccaaggcgattttcgatttaggaagtaaa 4013 Query: 206 ccgatatacttacggaaaattaagtaaggcttatcaagacatcaaaaggaaaacaatggg 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4014 ccgatatacttacggaaaattaagtaaggcttatcaagacatcaaaaggaaaacaatggg 4073 Query: 266 gaagagtagtaaagataaacgtgatctgtactacagaaaggctaaggaacaaggataccg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4074 gaagagtagtaaagataaacgtgatctgtactacagaaaggctaaggaacaaggataccg 4133 Query: 326 tgcgagatccgctttcaagttattacagttagacgacgactttcattttttgcagcaggc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4134 tgcgagatccgctttcaagttattacagttagacgacgactttcattttttgcagcaggc 4193 Query: 386 tgtacgagtggtggacctttgcgctgctccgggatcttggtctcaggtcttgtctagaag 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4194 tgtacgagtggtggacctttgcgctgctccgggatcttggtctcaggtcttgtctagaag 4253 Query: 446 actatttcctcagagttcagataattcagatagaaagattgttgcagttgatttgcagcc 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4254 actatttcctcagagttcagataattcagatagaaagattgttgcagttgatttgcagcc 4313 Query: 506 catgtcaccgatcgataatgtaatcacattacaggcggatattacacatcctaaaactct 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4314 catgtcaccgatcgataatgtaatcacattacaggcggatattacacatcctaaaactct 4373 Query: 566 acaaaccataaccgagctttttgagggtaagaaagctgattttatttgtagcgatggtgc 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4374 acaaaccataaccgagctttttgagggtaagaaagctgattttatttgtagcgatggtgc 4433 Query: 626 gccagatgtcaccggtttacacgatttagacgagtatgttcaacagcagttaattttaag 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4434 gccagatgtcaccggtttacacgatttagacgagtatgttcaacagcagttaattttaag 4493 Query: 686 cgcattacagctatctacctgtttgttaagaaaaggtggaaattttgttgccaaaatatt 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4494 cgcattacagctatctacctgtttgttaagaaaaggtggaaattttgttgccaaaatatt 4553 Query: 746 tagaggaagagatatagacatgttgtattctcagcttggatatctttttgagaaag-tat 804 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4554 tagaggaagagatatagacatgttgtattctcagcttggatatctttttgagaaagttat 4613 Query: 805 ttgcgctaaacc-agatcttcaaga-gaacatcattagaatcatttatcgtctgccttgg 862 |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 4614 ttgcgctaaaccaagatcttcaagaggaacatcattagaatcatttatcgtctgccttgg 4673 Query: 863 ttacaat-caccagcanactgggaacc-aaattagatgtaaatttttca-tagaagactt 919 ||||||| |||||||| |||||||||| |||||||||||||||| |||| |||||||||| Sbjct: 4674 ttacaatccaccagcaaactgggaaccaaaattagatgtaaattcttcagtagaagactt 4733 Query: 920 cttccagggatgcgatat 937 |||||||||||||||||| Sbjct: 4734 cttccagggatgcgatat 4751 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6132 Number of Sequences: 1807 Number of extensions: 6132 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 944 length of database: 10,358,551 effective HSP length: 16 effective length of query: 928 effective length of database: 10,329,639 effective search space: 9585904992 effective search space used: 9585904992 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)