BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC13ZH01RM1.SCF screened BAC_end
         (910 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1463                                                        1661   0.0  

>3x_Contig1463 
          Length = 9363

 Score = 1661 bits (838), Expect = 0.0
 Identities = 858/864 (99%), Gaps = 1/864 (0%)
 Strand = Plus / Plus

                                                                        
Query: 44   gcttgtcaccaagtggaggtagtgctgttcccggtgcaggaaacatgaccggaggtgtta 103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1762 gcttgtcaccaagtggaggtagtgctgttcccggtgcaggaaacatgaccggaggtgtta 1821

                                                                        
Query: 104  atgattctgccatcccaggttctgacctgatgatgcattatccccaacagtatatgaacc 163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1822 atgattctgccatcccaggttctgacctgatgatgcattatccccaacagtatatgaacc 1881

                                                                        
Query: 164  ataatgggcaaaggccaatgttctggatgaatccggatttgaattctagtgcc-tcgtcg 222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 1882 ataatgggcaaaggccaatgttctggatgaatccggatttgaattctagtgccatcgacg 1941

                                                                        
Query: 223  acaccactgcaggcgaagatccgcagaatcaggattcctttgtgcgcggtgcatcattca 282
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1942 acaccactgcaggcgaagatccgcagaatcaggattcctttgtgcgcggtgcatcattca 2001

                                                                        
Query: 283  ctttagaatcttctgaacaggggaatgatgccaaggtgccaggtgctaacacttctagaa 342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2002 ctttagaatcttctgaacaggggaatgatgccaaggtgccaggtgctaacacttctagaa 2061

                                                                        
Query: 343  gacaaactttccatgcagtgtcagctactgacttgttgaacaattctacttccagtccca 402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2062 gacaaactttccatgcagtgtcagctactgacttgttgaacaattctacttccagtccca 2121

                                                                        
Query: 403  ctgaaacgacggatgccactggtaccaatgcatcagcaacatcacccgaagcttctgcct 462
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2122 ctgaaacgacggatgccactggtaccaatgcatcagcaacatcacccgaagcttctgcct 2181

                                                                        
Query: 463  cgaaaaaagagatgcaggatcgtgtttatcctcaagctgctgcttacccttacaccggtg 522
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2182 cgaaaaaagagatgcaggatcgtgtttatcctcaagctgctgcttacccttacaccggtg 2241

                                                                        
Query: 523  cattgctgcaaccaaatcctgtactatctggccatccactgggtcatcatccccatccta 582
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2242 cattgctgcaaccaaatcctgtactatctggccatccactgggtcatcatccccatccta 2301

                                                                        
Query: 583  tcggttccccattccctggttacggttttaatacagctttctctcctgtcccgggcccta 642
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2302 tcggttccccattccctggttacggttttaatacagctttctctcctgtcccgggcccta 2361

                                                                        
Query: 643  ctaacacgttgaatgcaggttctccagccatctccgcagatggcaaagaagcaaacagca 702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2362 ctaacacgttgaatgcaggttctccagccatctccgcagatggcaaagaagcaaacagca 2421

                                                                        
Query: 703  gcggcgatccaagtggccaatctaaccgtcatgtacactctggaactaattccccaggat 762
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2422 gcggcgatccaagtggccaatctaaccgtcatgtacactctggaactaattccccaggat 2481

                                                                        
Query: 763  tgagtcaacctggtagtctgccaatgtcaggacctaacccgtggatgtttgctgctcctc 822
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2482 tgagtcaacctggtagtctgccaatgtcaggacctaacccgtggatgtttgctgctcctc 2541

                                                                        
Query: 823  acggtagtcctaacttcctggntccacaccctcatcattcgggtcacgcaagccctncag 882
            ||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| |||
Sbjct: 2542 acggtagtcctaacttcctggttccacaccctcatcatccgggtcacgcaggccctccag 2601

                                    
Query: 883  ctggccatcaaagaccacagagca 906
            ||||||||||||||||||||||||
Sbjct: 2602 ctggccatcaaagaccacagagca 2625


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4109
Number of Sequences: 1807
Number of extensions: 4109
Number of successful extensions: 20
Number of sequences better than 1.0e-20: 1
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)