BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZH01RM1.SCF screened BAC_end (910 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1463 1661 0.0 >3x_Contig1463 Length = 9363 Score = 1661 bits (838), Expect = 0.0 Identities = 858/864 (99%), Gaps = 1/864 (0%) Strand = Plus / Plus Query: 44 gcttgtcaccaagtggaggtagtgctgttcccggtgcaggaaacatgaccggaggtgtta 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1762 gcttgtcaccaagtggaggtagtgctgttcccggtgcaggaaacatgaccggaggtgtta 1821 Query: 104 atgattctgccatcccaggttctgacctgatgatgcattatccccaacagtatatgaacc 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1822 atgattctgccatcccaggttctgacctgatgatgcattatccccaacagtatatgaacc 1881 Query: 164 ataatgggcaaaggccaatgttctggatgaatccggatttgaattctagtgcc-tcgtcg 222 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 1882 ataatgggcaaaggccaatgttctggatgaatccggatttgaattctagtgccatcgacg 1941 Query: 223 acaccactgcaggcgaagatccgcagaatcaggattcctttgtgcgcggtgcatcattca 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1942 acaccactgcaggcgaagatccgcagaatcaggattcctttgtgcgcggtgcatcattca 2001 Query: 283 ctttagaatcttctgaacaggggaatgatgccaaggtgccaggtgctaacacttctagaa 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2002 ctttagaatcttctgaacaggggaatgatgccaaggtgccaggtgctaacacttctagaa 2061 Query: 343 gacaaactttccatgcagtgtcagctactgacttgttgaacaattctacttccagtccca 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2062 gacaaactttccatgcagtgtcagctactgacttgttgaacaattctacttccagtccca 2121 Query: 403 ctgaaacgacggatgccactggtaccaatgcatcagcaacatcacccgaagcttctgcct 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2122 ctgaaacgacggatgccactggtaccaatgcatcagcaacatcacccgaagcttctgcct 2181 Query: 463 cgaaaaaagagatgcaggatcgtgtttatcctcaagctgctgcttacccttacaccggtg 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2182 cgaaaaaagagatgcaggatcgtgtttatcctcaagctgctgcttacccttacaccggtg 2241 Query: 523 cattgctgcaaccaaatcctgtactatctggccatccactgggtcatcatccccatccta 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2242 cattgctgcaaccaaatcctgtactatctggccatccactgggtcatcatccccatccta 2301 Query: 583 tcggttccccattccctggttacggttttaatacagctttctctcctgtcccgggcccta 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2302 tcggttccccattccctggttacggttttaatacagctttctctcctgtcccgggcccta 2361 Query: 643 ctaacacgttgaatgcaggttctccagccatctccgcagatggcaaagaagcaaacagca 702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2362 ctaacacgttgaatgcaggttctccagccatctccgcagatggcaaagaagcaaacagca 2421 Query: 703 gcggcgatccaagtggccaatctaaccgtcatgtacactctggaactaattccccaggat 762 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2422 gcggcgatccaagtggccaatctaaccgtcatgtacactctggaactaattccccaggat 2481 Query: 763 tgagtcaacctggtagtctgccaatgtcaggacctaacccgtggatgtttgctgctcctc 822 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2482 tgagtcaacctggtagtctgccaatgtcaggacctaacccgtggatgtttgctgctcctc 2541 Query: 823 acggtagtcctaacttcctggntccacaccctcatcattcgggtcacgcaagccctncag 882 ||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| ||| Sbjct: 2542 acggtagtcctaacttcctggttccacaccctcatcatccgggtcacgcaggccctccag 2601 Query: 883 ctggccatcaaagaccacagagca 906 |||||||||||||||||||||||| Sbjct: 2602 ctggccatcaaagaccacagagca 2625 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4109 Number of Sequences: 1807 Number of extensions: 4109 Number of successful extensions: 20 Number of sequences better than 1.0e-20: 1 length of query: 910 length of database: 10,358,551 effective HSP length: 16 effective length of query: 894 effective length of database: 10,329,639 effective search space: 9234697266 effective search space used: 9234697266 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)