BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZH02FM1.SCF screened BAC_end (950 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1538 1513 0.0 >3x_Contig1538 Length = 9120 Score = 1513 bits (763), Expect = 0.0 Identities = 836/857 (97%), Gaps = 3/857 (0%) Strand = Plus / Plus Query: 85 tggcagaaatggttaatcaagtggttaacacgtcattgatggataatgcacaaacagccc 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1561 tggcagaaatggttaatcaagtggttaacacgtcattgatggataatgcacaaacagccc 1620 Query: 145 aagtgcccactactgaagagacaaaattagaaaaaacatccaaaaagaagaacaagtcga 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1621 aagtgcccactactgaagagacaaaattagaaaaaacatccaaaaagaagaacaagtcga 1680 Query: 205 agtcgaaaagtataattggtgatgattacgctccaaaaggtaaaagtaaggtgcctaaag 264 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1681 agtcgaaaagtagaagtggtgatgattacgctccaaaaggtaaaagtaaggtgcctaaag 1740 Query: 265 atacaaaaaagaaaggtacttcgtcttcaaagattaatcaagaaatcaaggcaatacctc 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1741 atacaaaaaagaaaggtacttcgtcttcaaagattaatcaagaaatcaaggcaatacctc 1800 Query: 325 ttgatccagaacttgtgaaagaaagtgcatcacaggcagctgtagctccagatgccaagg 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1801 ttgatccagaacttgtgaaagaaagtgcatcacaggcagctgtagctccagatgccaagg 1860 Query: 385 acacaacggatgtgtcccatttaagtactagtgatggatttgacctacatcaaatcatgc 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1861 acacaacggatgtgtcccatttaagtactagtgatggatttgacctacatcaaatcatgc 1920 Query: 445 aaaatgccatgtcgatggcatttcaagaacaagtacaaaatcaactacatccatcggtta 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1921 aaaatgccatgtcgatggcatttcaagaacaagtacaaaatcaactacatccatcggtta 1980 Query: 505 tggaacgtttcgacaaagaactttccgaaagtcaattctcagatggcctgtcccggaaaa 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1981 tggaacgtttcgacaaagaactttccgaaagtcaattctcagatggcctgtcccggaaaa 2040 Query: 565 ccattggagatagatcagttttgagatctcgctttgttccaccaaagaagaaaaagaagg 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2041 ccattggagatagatcagttttgagatctcgctttgttccaccaaagaagaaaaagaagg 2100 Query: 625 agaagaagaaaggagagttaaagtttaacaatatccatggcggactttcgaataccaaat 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2101 agaagaagaaaggagagttaaagtttaacaatatccatggcggactttcgaataccaaat 2160 Query: 685 tcagcggatctaataaaacaaatgtcggctcttaaattgttgttttcaagcctcaganaa 744 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 2161 tcagcggatctaataaaacaaatgtcggctctaaaattgttgttttcaagcctcagaaaa 2220 Query: 745 tcaaacacgaactagtcaataagggtttatcaacaacagaggaacgtttaagaaggatat 804 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2221 tcaaacacgaactagtcaataagggtttatcaacaacagaggaacgtttaagaaggaaat 2280 Query: 805 atagtaaaatagccagagaatgtgccaagactggcaagagactgactactgaacggtaaa 864 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 2281 atagtaaaatagccagagaatgtgccaagactgcaaagagactgactactgaacggaaaa 2340 Query: 865 aagagcttaaag-aggacatnaaatgggagaa-gattgactaaaaaatcacagggagcag 922 | |||| |||| || |||| |||| |||||| ||| ||||||||||||||||| ||||| Sbjct: 2341 agaagctaaaagaagaacataaaat-ggagaaggatagactaaaaaatcacaggaagcag 2399 Query: 923 cttaagggaggacaaaa 939 || |||| || |||||| Sbjct: 2400 ctcaaggaagaacaaaa 2416 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7883 Number of Sequences: 1807 Number of extensions: 7883 Number of successful extensions: 102 Number of sequences better than 1.0e-20: 1 length of query: 950 length of database: 10,358,551 effective HSP length: 16 effective length of query: 934 effective length of database: 10,329,639 effective search space: 9647882826 effective search space used: 9647882826 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)