BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC13ZH03FM1.SCF screened BAC_end (953 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig173 799 0.0 >3x_Contig173 Length = 1358 Score = 799 bits (403), Expect = 0.0 Identities = 431/439 (98%), Gaps = 1/439 (0%) Strand = Plus / Minus Query: 87 tttatattcgctagcttcggcagcatctactctcattgatataactaattaaaaattaat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 tttatattcgctagcttcggcagcatctactctcattgatataactaattaaaaattaat 379 Query: 147 aagaaagtatactgcagataaactaagcaaaggatggtcgaaataaggtacacacgattc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 aagaaagtatactgcagataaactaagcaaaggatggtcgaaataaggtacacacgattc 319 Query: 207 gatatcagtaatgacatggagttttccaccatcaagaaattgatcgatgaggatctcagt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 gatatcagtaatgacatggagttttccaccatcaagaaattgatcgatgaggatctcagt 259 Query: 267 gagccatattcgatatacgtgtacagatttttcctaaaccaatggccgaacctaacgtat 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 gagccatattcgatatacgtgtacagatttttcctaaaccaatggccgaacctaacgtat 199 Query: 327 ttggcatgggcagaaggatcgggtaagcccataggatgtatagtatgcaagagcgatact 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 ttggcatgggcagaaggatcgggtaagcccataggatgtatagtatgcaagagcgatact 139 Query: 387 cataatggagtgcggttaagaggatacattggcatgttagcagtggagaaacaatataga 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 138 cataatggagtgcggttaagaggatacattggcatgttagcagtggagaaacaatataca 79 Query: 447 ggccgtgggatagcgaaaaaactaattaccttagctatagatactatgattgatgaaaaa 506 ||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||| Sbjct: 78 ggccgtgggatagcgaaaaaact-attaccttagctatagatactctgattgttgaaatt 20 Query: 507 tgtgacgagattatgttgg 525 ||||||||||| |||||| Sbjct: 19 cgtgacgagattttgttgg 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,571 Number of Sequences: 1807 Number of extensions: 10571 Number of successful extensions: 1357 Number of sequences better than 1.0e-20: 1 length of query: 953 length of database: 10,358,551 effective HSP length: 16 effective length of query: 937 effective length of database: 10,329,639 effective search space: 9678871743 effective search space used: 9678871743 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)